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Add Wikipathways Fetch - #68

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willemdek11 wants to merge 4 commits into
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WikiPathways
Open

Add Wikipathways Fetch#68
willemdek11 wants to merge 4 commits into
masterfrom
WikiPathways

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@willemdek11

@willemdek11 willemdek11 commented Nov 11, 2020

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FOR CONTRIBUTOR:

  • - I have read the CONTRIBUTING.md document and this tool is appropriate for the tools-iuc repo.
  • - License permits unrestricted use (educational + commercial)
  • - This PR adds a new tool or tool collection
  • - This PR updates an existing tool or tool collection
  • - This PR does something else (explain below)

FOR REVIEWER:

  • .shed.yml file ok
    • Toolshed user erasmus-medical-center has access to associated toolshed repo(s)
  • Indentation is correct (4 spaces)
  • Tool version/build ok
  • <command/>
    • Text parameters, input and output files 'single quoted'
    • Use of <![CDATA[ ... ]]> tags
    • Parameters of type text or having optional="true" attribute are checked with if str($param) before being used
  • Data parameters have a format attribute containing datatypes recognised by Galaxy
  • Tests
    • Parameters are reasonably covered
    • Test files are appropriate
  • Help
    • Valid restructuredText and uses <![CDATA[ ... ]]> tags
  • Complies with other best practice in Best Practices Doc

Comment thread tools/wikipathways/.shed.yml Outdated
Comment thread tools/wikipathways/wikipathways_fetch.xml
Comment thread tools/wikipathways/wikipathways_fetch.xml Outdated
Comment thread tools/wikipathways/.shed.yml Outdated
Comment thread tools/wikipathways/wikipathways_fetch.R
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2 participants