🚧 [WIP] 🚑️ Hotfix 1.8.7: Restore longitudinal functionality - #2160

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shnizzedy wants to merge 33 commits into

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hotfix-1.8.7/longitudinal

Commits on Oct 15, 2024

:goal_net: Fall back on workflow name, then empty string if no "subject_id" in `cfg`
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08948a4
:bug: Set subject ID for longitudinal workflow
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2874287
:bookmark: Set version to `1.8.7.post1.dev1`
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47f1de1

Commits on Oct 31, 2024

:package: Disable variant image builds
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cc72177
:bug: Pass `get` method through from `Configuration.dict()`
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d2f960a
:necktie: Persist longitudinal resource pool
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cb5861b
:loud_sound: :alembic: Pickle rpool
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282f3f7
:alembic: :loud_sound: Pickle lots of rpools
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828d589
:alien: Update path matching for longitudinal
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0cd1639
:bug: Iterate keys without mutating
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7fb44cc
:bug: Fallback to config for regtool
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f2da817
:necktie: Use longitudinal transform
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5d34172
:alembic: Don't delete T1w key
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87e723e
:necktie: Differentiate T1w/longitudinal space
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626984d
:bug: Include `space-longitudinal_pveseg` in `tissue_seg_fsl)fast`
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f6c27f8
:recycle: Simplify outputs definition
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8a17f72
:alien: Only call `ingress_output_dir` if "derivatives_dir"
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2a54356
:recycle: Fix broken connections in `anat_longitudinal_wf`
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b09257a

Commits on Nov 1, 2024

:bug: Clone instead of rename
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8666475
:bug: Fix header reading for bandpass filters
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024f28f
:memo: Add bandpass filter fix to CHANGELOG
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87dd957
:construction_worker: Skip `update-yaml-comments` job in pre-commit CI
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99adf4b
:construction_worker: Merge updated `.github/scripts/autoversioning.sh` from `develop`
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161b40d
:recycle: SSOT `warp_mask_to_template` decorator
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e916d33
:construction: Restore `template_node` connections
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16cb70c
:coffin: Remove temporary debugging code
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4679ef4
:coffin: Remove commented-out code
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6eef5af
:rewind: Revert f2da817f5
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9169203
:recycle: SSOT `warp_to_template`
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e7e82b7

Commits on Nov 4, 2024

fixup! :bug: Clone instead of rename
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4ddb58f

Commits on Nov 8, 2024

:necktie: Handle connections from unconnected graphs that run separately
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0cf793f

Commits on Nov 11, 2024

:necktie: Clone *and* handle unconnected graphs
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606638c
:recycle: Name each preparatory graph uniquely
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4bb363c