Fix NCList having string phase field sometimes (#41)

Author: cmdcolin

.github/workflows/publish.yml

@@ -0,0 +1,27 @@
+name: Publish
+
+on:
+  push:
+    tags:
+      - 'v*'
+
+jobs:
+  publish:
+    name: Publish to npm
+    runs-on: ubuntu-latest
+    permissions:
+      id-token: write
+      contents: read
+    steps:
+      - uses: actions/checkout@v4
+      - uses: pnpm/action-setup@v4
+        with:
+          version: 10
+      - uses: actions/setup-node@v4
+        with:
+          node-version: 24.x
+          cache: pnpm
+          registry-url: 'https://registry.npmjs.org'
+      - run: pnpm install --frozen-lockfile
+      - run: pnpm build
+      - run: npm publish --access public

.github/workflows/push.yml

@@ -4,21 +4,18 @@ on: push
 
 jobs:
   test:
-    name: Lint, build, and test on node 20.x and ubuntu-latest
+    name: Lint, build, and test
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v4
-      - name: Use Node.js 20.x
-        uses: actions/setup-node@v4
+      - uses: pnpm/action-setup@v4
         with:
-          node-version: 20.x
-      - name: Install deps (with cache)
-        uses: bahmutov/npm-install@v1
-      - name: Lint codebase
-        run: yarn lint
-      - name: Build codebase
-        run: yarn build
-      - name: Test codebase
-        run: yarn test --coverage
-      - name: Upload coverage
-        run: bash <(curl -s https://codecov.io/bash)
+          version: 10
+      - uses: actions/setup-node@v4
+        with:
+          node-version: 22.x
+          cache: pnpm
+      - run: pnpm install --frozen-lockfile
+      - run: pnpm lint
+      - run: pnpm build
+      - run: pnpm test

.prettierignore

@@ -1 +1,2 @@
 test/data
+pnpm-lock.yaml

eslint.config.mjs

@@ -12,6 +12,7 @@ export default defineConfig(
       'esm/*',
       'example/*',
       'eslint.config.mjs',
+      'vitest.config.ts',
     ],
   },
   {

package.json

@@ -12,7 +12,10 @@
       "require": "./dist/index.js"
     }
   },
-  "repository": "github:GMOD/nclist-js",
+  "repository": {
+    "type": "git",
+    "url": "https://github.com/GMOD/nclist-js.git"
+  },
   "author": {
     "name": "Robert Buels",
     "email": "rbuels@gmail.com",
@@ -28,42 +31,41 @@
     "esm",
     "src"
   ],
-  "engines": {
-    "node": ">=8"
-  },
   "scripts": {
+    "format": "prettier --write .",
     "test": "vitest",
-    "coverage": "yarn test --coverage",
+    "coverage": "pnpm test --coverage",
     "lint": "eslint --report-unused-disable-directives --max-warnings 0",
     "docs": "documentation readme --shallow src/feature_store.ts --section API",
     "clean": "rimraf dist esm",
-    "prebuild": "yarn docs && yarn clean && yarn lint",
+    "prebuild": "pnpm docs && pnpm clean && pnpm lint",
     "build:esm": "tsc --outDir esm",
-    "build:es5": "tsc --module commonjs --outDir dist",
+    "build:es5": "tsc --module commonjs --moduleResolution bundler --outDir dist",
     "postbuild:es5": "echo '{\"type\": \"commonjs\"}' > dist/package.json",
-    "build": "yarn build:esm && yarn build:es5",
-    "prepublishOnly": "yarn test --run && yarn build",
+    "build": "pnpm build:esm && pnpm build:es5",
+    "prepublishOnly": "pnpm test --run && pnpm build",
     "postversion": "git push --follow-tags"
   },
   "devDependencies": {
-    "@types/express": "^5.0.5",
-    "@vitest/coverage-v8": "^4.0.6",
+    "@eslint/js": "^10.0.1",
+    "@types/express": "^5.0.6",
+    "@vitest/coverage-v8": "^4.1.2",
     "cross-fetch": "^4.1.0",
-    "documentation": "^14.0.1",
-    "eslint": "^9.5.0",
-    "eslint-plugin-import": "^2.31.0",
-    "eslint-plugin-unicorn": "^62.0.0",
-    "express": "^5.1.0",
-    "generic-filehandle2": "^2.0.1",
-    "get-port": "^7.1.0",
-    "prettier": "^3.5.3",
-    "rimraf": "^6.0.1",
-    "typescript": "^5.0.4",
-    "typescript-eslint": "^8.18.0",
-    "vitest": "^4.0.6"
+    "documentation": "^14.0.3",
+    "eslint": "^9.39.4",
+    "eslint-plugin-import": "^2.32.0",
+    "eslint-plugin-unicorn": "^64.0.0",
+    "express": "^5.2.1",
+    "generic-filehandle2": "^2.1.4",
+    "get-port": "^7.2.0",
+    "prettier": "^3.8.1",
+    "rimraf": "^6.1.3",
+    "typescript": "^6.0.2",
+    "typescript-eslint": "^8.58.0",
+    "vitest": "^4.1.2"
   },
   "dependencies": {
-    "@gmod/abortable-promise-cache": "^3.0.1",
+    "@gmod/abortable-promise-cache": "^3.0.4",
     "@jbrowse/quick-lru": "^7.3.5",
     "@jridgewell/resolve-uri": "^3.1.2"
   },