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the GMOD database schema
PLpgSQL 43 23
Source code for JBrowse 2, a modern React-based genome browser
TypeScript 267 73
JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.
JavaScript 471 198
Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.
Groovy 137 87
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Parse BAM and BAM index files in javascript for node and the browser
JBrowse 2 plugin for editing annotations on an Apollo server
High performance Variant Call Format (VCF) parser in pure JavaScript
Nodejs filehandle for reading bgzip+.gzi compressed files
Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi
Parser for bigwig and bigbed files
Read Tabix-indexed files, either with .tbi or .csi indexes, in node or the browser
JBrowse 2 genome hubs... for all the things!
Hierarchical clustering in javascript
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