v2.0.0

What's Changed

• Update README.md by @Biaaaaaa12 in #462
• Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.9.0 by @dependabot[bot] in #435
• Bump docker/build-push-action from 5.3.0 to 6.5.0 by @dependabot[bot] in #440
• Bump docker/login-action from 3.1.0 to 3.3.0 by @dependabot[bot] in #441
• Added more logging throughout the repository by @abdrysdale in #474
• Bump docker/login-action from 3.3.0 to 3.6.0 by @dependabot[bot] in #485
• Staging laundry list of changes for testing. by @luissantosHCIT in #490
• BREAKING CHANGE: Merge changes from Hazen Wales by @abdrysdale in #494
• Release v2.0.0a2: Breaking CLI changes, ACR task improvements, and infrastructure modernization by @abdrysdale in #497
• v2.0.0a3 alpha release by @abdrysdale in #499
• Version 2.0.0a4 pre-release by @abdrysdale in #500
• V2.0.0a by @rs-sprout98 in #501
• fix: ignore .DS_Store files in subtract directory by @abdrysdale in #505
• Added a batch command for reproducible workflows by @abdrysdale in #502
• Docs/#506 update docs to v2 by @abdrysdale in #507
• Fix uniformity plot bug where x and y coordinates were swapped by @abdrysdale in #509
• feat(discovery): add fuzzy string matching for SNR detection by @abdrysdale in #510
• feat(orchestration): automatically set report=True for all or intermdiate levels by @abdrysdale in #511
• Bump version from 2.0.0a5 to 2.0.0a6 by @abdrysdale in #512
• Slice thickness v2 by @abdrysdale in #504
• Fix/slice position delta peak error by @abdrysdale in #513
• Fix/batch dicom extension bug by @abdrysdale in #514

New Contributors

• @Biaaaaaa12 made their first contribution in #462
• @abdrysdale made their first contribution in #474
• @luissantosHCIT made their first contribution in #490

Full Changelog: v1.3.4...v2.0.0

v2.0.0a9

• Fixed build process.

Full Changelog: v2.0.0a8...v2.0.0a9

v2.0.0a8

What's Changed

• Fix importlib error in batch tasks

Full Changelog: v2.0.0a7...v2.0.0a8

v2.0.0a7

What's Changed

• Fixed bugs in batch config with different DICOM extensions.
• Slice thickness v2 by @abdrysdale in #504

Full Changelog: v2.0.0a6...v2.0.0a7

v2.0.0a10

What's Changed

• Slice thickness v2 by @abdrysdale in #504
• Fix/slice position delta peak error by @abdrysdale in #513
• Fix/batch dicom extension bug by @abdrysdale in #514

Full Changelog: v2.0.0a6...v2.0.0a10

v2.0.0a6

What's Changed

• Docs/#506 update docs to v2 by @abdrysdale in #507
• Fix uniformity plot bug where x and y coordinates were swapped by @abdrysdale in #509
• feat(discovery): add fuzzy string matching for SNR detection by @abdrysdale in #510
• feat(orchestration): automatically set report=True for all or intermdiate levels by @abdrysdale in #511
• Bump version from 2.0.0a5 to 2.0.0a6 by @abdrysdale in #512

Full Changelog: v2.0.0a5...v2.0.0a6

v2.0.0a5

What's Changed

• Update README.md by @Biaaaaaa12 in #462
• Bump pypa/gh-action-pypi-publish from 1.8.14 to 1.9.0 by @dependabot[bot] in #435
• Bump docker/build-push-action from 5.3.0 to 6.5.0 by @dependabot[bot] in #440
• Bump docker/login-action from 3.1.0 to 3.3.0 by @dependabot[bot] in #441
• Added more logging throughout the repository by @abdrysdale in #474
• Bump docker/login-action from 3.3.0 to 3.6.0 by @dependabot[bot] in #485
• Staging laundry list of changes for testing. by @luissantosHCIT in #490
• BREAKING CHANGE: Merge changes from Hazen Wales by @abdrysdale in #494
• Release v2.0.0a2: Breaking CLI changes, ACR task improvements, and infrastructure modernization by @abdrysdale in #497
• v2.0.0a3 alpha release by @abdrysdale in #499
• Version 2.0.0a4 pre-release by @abdrysdale in #500
• V2.0.0a by @rs-sprout98 in #501
• fix: ignore .DS_Store files in subtract directory by @abdrysdale in #505
• Added a batch command for reproducible workflows by @abdrysdale in #502

New Contributors

• @Biaaaaaa12 made their first contribution in #462
• @abdrysdale made their first contribution in #474
• @luissantosHCIT made their first contribution in #490

Full Changelog: v1.3.4...v2.0.0a5

Release 1.3.4

What's Changed

Sagittal ACR images acquired on Philips scanners are now rotated automatically in Hazen, which removes the need for manual rotation in a DICOM viewer. User documentation for the ACR phantom is now improved, with more detail added. The ACR uniformity task is now more robust. And finally, Hazen is now compatible up to Python version 3.12.

ACR Task Updates

• Rotates sagittal ACR images by @rs-sprout98 in #445
• acr_uniformity update by @mollybuckley in #451

Documentation Updates

• Updated user documentation by @RebeccaThornley in #428
• Update contributing guidelines by @mollybuckley in #458

Compatibility

• Python 3.12 compatibility by @mollybuckley in #459

New Contributors

• @rs-sprout98 made their first contribution in #445

Full Changelog: v1.3.3...v1.3.4

v1.3.3

What's Changed

Small update to allow compatibility with Python version 3.11 and require at least Python 3.9 to install this version of hazen.
Additional update to allow running hazen with an input folder that might have other subfolders or additional file types that are ignored, rather than causing an error. Only DICOM files with a pixel data (image) are being used by hazen for calculations.

• Address python version compatibility by @sophie22 in #422
• Ignore files in the input folder that have no pixel data by @sophie22 in #423

Full Changelog: v1.3.2...v1.3.3

v1.3.2

What's Changed

Standardised docstrings in code and improved auto generated documentation on ReadTheDocs.
Improved task descriptions for ACR tasks on ReadTheDocs.
MagNet SNR task now has optional CLI argument to specify head or body coil.

ACR Task Updates

Updates to ACR object class methods: phantom orientation, slice ordering and locating phantom centre.
ACR geometric accuracy is now measuring from the correct slices.
Improvement to ACR slice thickness task: limit what values are included in the interpolation.

• Coil options by @mollybuckley in #388
• Apply Python script formatting by @sophie22 in #401
• 397 standardise docstrings by @sophie22 in #398
• 378 geom accuracy wrong slices by @mollybuckley in #399
• Generate documentation from docstrings by @sophie22 in #403
• ACR slice ordering by @sophie22 in #409
• Updated tasks.rst and references.bib by @RebeccaThornley in #415
• ACR Object orientation - bugfix by @sophie22 in #416
• ACR slice thickness improvement by @sophie22 in #417
• improve circle detection in ACR Object by @sophie22 in #418
• release 1.3.2 by @mollybuckley in #419

New Contributors

• @mollybuckley made their first contribution in #388
• @RebeccaThornley made their first contribution in #415

Full Changelog: v1.3.1...v1.3.2