chore(collection-seeding): bump all dependencies to latest versions

[fhennig]

Summary

• requests: >=2.33.1 → >=2.34
• pytest: >=9.0.3 → >=9.1
• responses: >=0.26.0 → >=0.26.2
• ruff: >=0.9 → >=0.15
• Formatter applied after ruff update (line-length reformatting in rsv_nextclade_lineages.py and its tests)

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Project	Deployment	Actions	Updated (UTC)
dashboards	Ready	Preview, Comment	Jul 9, 2026 7:30am

[Copilot]

Pull request overview

Updates the collection-seeding/ Python workspace dependencies and refreshes formatting after the ruff change, keeping the seeding tooling and its tests consistent with the updated environment.

Changes:

• Bumped PyPI dependency constraints in collection-seeding/pixi.toml (requests/pytest/responses/ruff).
• Regenerated collection-seeding/pixi.lock to reflect updated resolved versions.
• Applied formatter-driven line wrapping in rsv_nextclade_lineages.py and its corresponding tests.

Reviewed changes

Copilot reviewed 3 out of 4 changed files in this pull request and generated 2 comments.

File	Description
collection-seeding/pixi.toml	Updates dependency constraints for requests/pytest/responses/ruff.
collection-seeding/pixi.lock	Updates the lockfile to the newly resolved dependency versions.
collection-seeding/sources/rsv_nextclade_lineages.py	Formatter-only wrapping of list comprehensions/returns (no logic change intended).
collection-seeding/tests/test_rsv_nextclade_lineages.py	Formatter-only wrapping of an assertion list literal.

[fengelniederhammer]

Let's also configure dependabot for the seeder?

[fengelniederhammer]

@copilot add a section to the dependabot config for automatic updates of these Python dependencies.

[Copilot]

@copilot add a section to the dependabot config for automatic updates of these Python dependencies.

Added a pip ecosystem section for collection-seeding/ in .github/dependabot.yml (weekly, grouped minor/patch updates with chore(collection-seeding) prefix). Committed in chore: add dependabot pip config for collection-seeding.