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Feature/add mz tab m examples#229

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sneumann wants to merge 4 commits intomasterfrom
feature/add-mzTabM-examples
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Feature/add mz tab m examples#229
sneumann wants to merge 4 commits intomasterfrom
feature/add-mzTabM-examples

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@sneumann sneumann commented Apr 1, 2025

Providing a manually modified/fixed version of an OpenMS example

sneumann added 4 commits April 1, 2025 09:37
Validator errors:
[Error-1012] line 199: "Column ms_level" value "null" is not a valid parameter.
[Error-1012] line 200: "Column identification_method" value "null" is not a valid parameter.

replace nulls using (shoule be tab before and after the null):
sed -i -e '/^SME/ s/    null    null    1/      [,,OpenMS TOPP,]        [MS,MS:1000511,ms level,1]      1/' openms-MzTabMFile_output_1.mztab
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