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how to install sctools

Status: Open.

#80 In HumanCellAtlas/sctools;

· zhq90 opened on Aug 26, 2020

Generalize Barcode Platform r1 and i7 Inputs

Status: Open.

#59 In HumanCellAtlas/sctools;

· benjamincarlin opened on Mar 11, 2019

Setuptools-scm causes documentation build to fail

Status: Open.

#52 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Oct 12, 2018

Remove Improper use of Tempfile.TemporaryDirectory()

Status: Open.

#45 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Jul 12, 2018

Extract constants (CB, UB, GE, CR, etc.) to a global consts python file

ENHEnhancementEnhancement

Status: Open.

#44 In HumanCellAtlas/sctools;

· mbabadi opened on Jul 5, 2018

Benchmark biopython gff, pysam fastx and fasta

Status: Open.

#35 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Apr 14, 2018

HTS-spec allows marking of duplicate reads. Can we mark duplicate fragments?

ENHEnhancementEnhancement

Status: Open.

#30 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Mar 30, 2018

SCTools windows compatibility

Status: Open.

#29 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Mar 30, 2018

Attach10xBarcodes and TagSplitBam should be combined

ENHEnhancementEnhancement

Status: Open.

#28 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Mar 30, 2018

Fastq module is unnecessarily complicated

ENHEnhancementEnhancement

Status: Open.

#26 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Mar 29, 2018

Add Functional Tests

ENHEnhancementEnhancement

Status: Open.

#25 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Mar 29, 2018

SC Tools needs a CONTRIBUTING.md

ENHEnhancementEnhancement

Q4-2018

Status: Open.

#24 In HumanCellAtlas/sctools;

· ambrosejcarr opened on Mar 27, 2018