Code

Add FastQC to Optimus and SmartSeq2#202

Code

Open

kachulis wants to merge 15 commits intomasterHumanCellAtlas/skylab:masterfrom ck_fastqcHumanCellAtlas/skylab:ck_fastqcCopy head branch name to clipboard

+166-7

Commits

Commits on May 13, 2019

• Adding FastQC to optimus and SS2

  kachulis

  committed
  5abc522

  Copy full SHA for 5abc522

• remove test workflow

  kachulis

  committed
  6646b3c

  Copy full SHA for 6646b3c

Commits on May 14, 2019

• run fastqc on only subset of reads in fastqs

  kachulis

  committed
  497f2a0

  Copy full SHA for 497f2a0

• adding dependencies to fix tests; reverting to draft2

  kachulis

  committed
  6f3bda6

  Copy full SHA for 6f3bda6

• adjusting disk size calculations

  kachulis

  committed
  23e57ed

  Copy full SHA for 23e57ed

Commits on May 15, 2019

• tests:

  kachulis

  committed
  2436d2f

  Copy full SHA for 2436d2f

• fixing tests

  kachulis

  committed
  0905e04

  Copy full SHA for 0905e04

• fixing tests

  kachulis

  committed
  5adc1a6

  Copy full SHA for 5adc1a6

• tests

  kachulis

  committed
  e866909

  Copy full SHA for e866909

• tests

  kachulis

  committed
  78b4ef3

  Copy full SHA for 78b4ef3

• tests should now pass...

  kachulis

  committed
  b296533

  Copy full SHA for b296533

Commits on May 16, 2019

• Phil comments

  kachulis

  committed
  abb02f0

  Copy full SHA for abb02f0

• tests

  kachulis

  committed
  2b84308

  Copy full SHA for 2b84308

• tests

  kachulis

  committed
  e794f71

  Copy full SHA for e794f71

• fixing tests

  kachulis

  committed
  c139eef

  Copy full SHA for c139eef