Analysis files accompanying paper entitle/topic "BRD4 & erythroid differentiation and development"

By Hyacinth Meng 202110---202312---202402

This repository contains the bash and R code that used to analyze and generate the images for the paper. Files contained are:

1. Analyse Epigenetics compound screening
2. Analyse Digital RNA-Sequencing (UID-RNAseq)
3. Analyse bulk RNAseq
4. Analyse bulk ATAcseq
5. Analyse bulk Cuttag
6. Analyse bulk Chipseq
7. Time Series Gene Clustering（RNAseq）
8. Analyse co-immunoprecipitation (Co-IP) and mass spectrum (MS) on BRD4

Please contact the author of the paper, Ye Meng ([email protected]) OR Meng zhang([email protected] ), with any comments, concerns or requests.

Link： BRD4 acts as a transcriptional repressor of RhoB to inhibit terminal erythropoiesis https://jhoonline.biomedcentral.com/articles/10.1186/s13045-025-01721-2