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Bug fix with no defocus #936

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Merged
albertmena merged 1 commit into from
Nov 11, 2024
Merged

Bug fix with no defocus #936

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4 changes: 3 additions & 1 deletion src/xmipp/libraries/reconstruction/ctf_estimate_from_psd.cpp
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Original file line number Diff line number Diff line change
Expand Up @@ -405,7 +405,7 @@ void ProgCTFEstimateFromPSD::saveIntermediateResults(const FileName &fn_root, bo
"save_intermediate_results::Cannot open plot file for writing\n");
plotX << "# freq_dig freq_angstrom model psd enhanced logModel logPsd\n";
plotY << "# freq_dig freq_angstrom model psd enhanced logModel logPsd\n";
//plot_radial << "# freq_dig freq_angstrom model psd enhanced logModel logPsd\n";
plot_radial << "# freq_dig freq_angstrom model psd enhanced logModel logPsd\n";

// Generate cut along X
for (int i = STARTINGY(save()); i <= FINISHINGY(save()) / 2; i++)
Expand Down Expand Up @@ -2357,6 +2357,8 @@ double ROUT_Adjust_CTF(ProgCTFEstimateFromPSD &prm, CTFDescription &output_ctfmo
steps(10) = steps(11) = 0;
if (std::floor(prm.initial_ctfmodel.VPP_radius) == 0)
steps(36) = 0; //VPP phase shift
if (prm.noDefocusEstimate)
steps(0)=steps(1)=0;

powellOptimizer(*prm.adjust_params, 0 + 1, ALL_CTF_PARAMETERS, CTF_fitness,
global_prm, 0.01, fitness, iter, steps, prm.show_optimization);
Expand Down
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