3.23.07 - Morpheus

Xmipp Programs

• New programs
  • image_peak_high_contrast(for detecting high contrast regions in tomographic reconstruction)
  • misaligment_detection (to detect misalignment in tomographic reconstructions from high-contrast regions)
  • deep_global_assignment
  • deep_center
• Programs updated
  • xmipp_angular_distance: new features
  • tomo_extract_particles: new features
  • subtract_projection: parallelization with mpi
  • tomo_extract_subtomograms: allow downsampling of features
  • angular_resolution_alignment: Detect misalignment with resolution
• Programs fixed
  • align_volume_and_particles: Fixed error
  • angular_project_library: Removed deterministic behaviour (mpi)
  • volumen_subtraction: fixed bug
• Deprecated programs (For more details visit)
  • classify_kmeans_2D
  • rotational_spectra
  • particle_boxsize

Installation and user guide

• New clearer, more intuitive and informative installer. It also creates a file to facilitate user support.
• Refactored the deep learning toolkit, more robust and new environment with updated tensorflow.
• Updated requirement.

More Xmipp

• Added half precission suport to numpy
• Added the ability to read and write CIF files
• Modular design of winner filter
• Decoupling XmippTomo from XmippSPA
• Fix Zernike equation
• Removed all occurrences of non base-class default destructors
• Improved MultidimArray performance
• Added support for half precision floating point numbers in MRCs
• Assign tiff to gain files
• adding half maps labels