DSERV-1291 Scorpion adapter#713
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mingjiecn
requested changes
May 27, 2026
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| for row in data_csv: | ||
| props = { | ||
| '_key': row['tf_ensembl'] + '_' + row['target_ensembl'] + '_' + self.LABEL, |
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self.LABEL has space in it, not sure if this is good for key generation. Need to replace space, or use other string for example file accession?
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ohh great catch... will replace by underline
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| igvf_file_accessions: | ||
| Scorpion: | ||
| - IGVFFI3035IXUW |
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Need to also merge in dev branch and generate new files_filesets data file for IGVF source.
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may need to regenerate it again since we don't know which data loading ticket goes in first...
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the only data loading ticket ready to QA is dual-ipa, it's already generated, so I think the JSONLs in this PR are the latest
mingjiecn
approved these changes
Jun 2, 2026
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