[pre-commit.ci] pre-commit autoupdate #55
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updates: - [github.com/pre-commit/pre-commit-hooks: v5.0.0 → v6.0.0](pre-commit/pre-commit-hooks@v5.0.0...v6.0.0) - [github.com/astral-sh/ruff-pre-commit: v0.11.2 → v0.14.10](astral-sh/ruff-pre-commit@v0.11.2...v0.14.10) - [github.com/pre-commit/mirrors-mypy: v1.15.0 → v1.19.1](pre-commit/mirrors-mypy@v1.15.0...v1.19.1) - [github.com/igorshubovych/markdownlint-cli: v0.44.0 → v0.47.0](igorshubovych/markdownlint-cli@v0.44.0...v0.47.0) - [github.com/snakemake/snakefmt: v0.11.0 → v0.11.2](snakemake/snakefmt@v0.11.0...v0.11.2)
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updates: