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New version: PhyloNetworks v1.0.0#121148

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Dec 10, 2024
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New version: PhyloNetworks v1.0.0#121148
JuliaTagBot merged 1 commit intomasterfrom
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PhyloNetworks v1.0.0 is a major change from version v0.16.4, to serve as a "core" for the manipulation of phylogenies, used by other packages with more specialized functionalities.
- many functionalities were moved to other packages (e.g. SNaQ.jl and PhyloTraits.jl)
- new core functionalities are available.

UUID: 33ad39ac-ed31-50eb-9b15-43d0656eaa72
Repo: https://github.com/JuliaPhylo/PhyloNetworks.jl.git
Tree: 9c76a7addc40bab6097e7c87eb2389df7b6130cf

Registrator tree SHA: 17aec322677d9b81cdd6b9b9236b09a3f1374c6a
JuliaRegistrator referenced this pull request in JuliaPhylo/PhyloNetworks.jl Dec 10, 2024
new features:
- countquartetsintrees (was in v0.16 but not v0.17)
- tablequartetCF (was writeTableCF in v0.16, now returns NamedTuple and has option to skip 4-taxon sets with no informative genes)
- tiplabels for vector of phylogenies: union

breaking changes: renaming with small case

---------

Co-authored-by: Joshua Justison (jjustison)
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@JuliaTagBot JuliaTagBot merged commit 01a5d85 into master Dec 10, 2024
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@JuliaTagBot JuliaTagBot deleted the registrator-phylonetworks-33ad39ac-v1.0.0-621886859c branch December 10, 2024 21:47
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