Add codespell support with configuration and fixes#123
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…ists Added skip for ISO/IEC XSD schemas, ignore-regex for camelCase/PascalCase identifiers, bold-letter markdown/LaTeX formatting, regex character classes, and URLs. Added domain-specific terms to ignore-words-list covering scientific abbreviations, library names, medical terminology, and code identifiers. Co-Authored-By: Claude Code 2.1.92 / Claude Opus 4.6 <noreply@anthropic.com>
Co-Authored-By: Claude Code 2.1.92 / Claude Opus 4.6 <noreply@anthropic.com>
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Add codespell configuration and fix existing typos.
More about codespell: https://github.com/codespell-project/codespell
I personally introduced it to over a hundred of projects already mostly with a positive feedback
(see the "improveit-dashboard").
CI workflow has 'permissions' set only to 'read' so also should be safe.
Changes
Configuration & Infrastructure
.codespellrcwith comprehensive skip patterns (ISO/IEC XSD schemas)mainand PRscodespell-project/actions-codespell@v2with pinned SHARegex Pattern Exclusions
Configured
ignore-regexto skip:atLeast,fromT,prSet, etc.)**S**pecific) and LaTeX (\textbf{S}pecific)[Ss]tage)Domain-Specific Whitelist
Added ~60 legitimate terms that codespell flags as typos, including:
simpy(SimPy),braket(Amazon Braket),atomate,scarches(scArches),namdehr(Electronic Health Records),hsa(Homo sapiens),otu(Operational Taxonomic Unit),cna(Copy Number Alteration),mape(Mean Absolute Percentage Error)infarction,abd(abdomen),anc(Absolute Neutrophil Count),ot(Occupational Therapy)ket(Dirac notation),blosum(substitution matrix),fallow(Gutenberg diagram),trough(business cycle),stard(reporting standard),lod(Limit of Detection)ser,fpr,sems,whis,vor,te,ontop,savTypo Fixes
questons→questions(imaging-data-commons/SKILL.md)Testing
✅ Codespell passes with zero errors after all configuration and fixes
🤖 Generated with Claude Code