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feat: add skill for Boolean Network modeling#89

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feat: add skill for Boolean Network modeling#89
parulm wants to merge 1 commit into
K-Dense-AI:mainfrom
parulm:booleanskill

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@parulm parulm commented Mar 9, 2026

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@parulm parulm changed the title Add booleannet skill feat: add skill for Boolean Network modeling Mar 9, 2026
jahyunlee00299 added a commit to jahyunlee00299/claude-scientific-skills that referenced this pull request Mar 14, 2026
Add standalone calculate_tm_neb() function that calls the NEB Q5 Tm
Calculator API with configurable primer/Na+/Mg2+ concentrations.
Integrate as primary Tm source in iPCRDesignerBase with automatic
Biopython NN fallback when API is unreachable.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
jahyunlee00299 added a commit to jahyunlee00299/claude-scientific-skills that referenced this pull request Mar 14, 2026
Add NEB Q5 Tm API (https://tmapi.neb.com/tm/q5/) as the primary Tm
calculation method in iPCRDesignerBase, with Biopython NN as fallback.
Includes class-level cache and lazy connectivity check.

Also adds iPCRInsertDesigner to package __init__.py exports.

Closes K-Dense-AI#89

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
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