Update citation in README

.github/workflows/lint.yml

@@ -15,7 +15,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [3.9]
+        python-version: [3.13]
 
     steps:
       - name: Checkout github repo

.github/workflows/notebooks.yml

@@ -2,7 +2,7 @@ name: notebooks
 
 on:
   schedule:
-    - cron: "0 12 * * MON" # run job every Monday at 7.00a EST
+    - cron: "0 0 1 * *" # run job every Monday at 7.00a EST
   push:
     branches:
       - main
@@ -13,7 +13,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ["3.9", "3.10", "3.11", "3.12"]
+        python-version: ["3.10", "3.11", "3.12", "3.13"]
 
     steps:
       - name: Checkout github repo

.github/workflows/pytest.yml

@@ -15,7 +15,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ["3.9", "3.10", "3.11", "3.12"]
+        python-version: ["3.10", "3.11", "3.12", "3.13"]
 
     steps:
       - name: Checkout github repo

README.md

@@ -108,20 +108,14 @@ Issues marked with `contributions welcome` or `good first issue` are particularl
 If you use this software for your research, please cite using the following bibtex entry:
 
 ```
-@ARTICLE{mendoza2024btk,
-       author = {{Mendoza}, Ismael and {Torchylo}, Andrii and {Sainrat}, Thomas and {Guinot}, Axel and {Boucaud}, Alexandre and {Paillassa}, Maxime and {Avestruz}, Camille and {Adari}, Prakruth and {Aubourg}, Eric and {Biswas}, Biswajit and {Buchanan}, James and {Burchat}, Patricia and {Doux}, Cyrille and {Joseph}, Remy and {Kamath}, Sowmya and {Malz}, Alex I. and {Merz}, Grant and {Miyatake}, Hironao and {Roucelle}, C{\'e}cile and {Zhang}, Tianqing and {the LSST Dark Energy Science Collaboration}},
-        title = "{The Blending ToolKit: A simulation framework for evaluation of galaxy detection and deblending}",
-      journal = {arXiv e-prints},
-     keywords = {Astrophysics - Instrumentation and Methods for Astrophysics, Astrophysics - Cosmology and Nongalactic Astrophysics},
-         year = 2024,
-        month = sep,
-          eid = {arXiv:2409.06986},
-        pages = {arXiv:2409.06986},
-          doi = {10.48550/arXiv.2409.06986},
-archivePrefix = {arXiv},
-       eprint = {2409.06986},
- primaryClass = {astro-ph.IM},
-       adsurl = {https://ui.adsabs.harvard.edu/abs/2024arXiv240906986M},
-      adsnote = {Provided by the SAO/NASA Astrophysics Data System}
+@article{article,
+author = {Mendoza, Ismael and Torchylo, Andrii and Sainrat, Thomas and Guinot, Axel and Boucaud, Alexandre and Paillasa, Maxime and Avestruz, Camille and Adari, Prakruth and Aubourg, Eric and Biswas, Biswajit and Buchanan, James and Burchat, Patricia and Doux, Cyrille and Joseph, Remy and Kamath, Sowmya and Malz, Alex and Merz, Grant and Miyatake, Hironao and Roucelle, Cécile and Zhang, Tianqing},
+year = {2025},
+month = {02},
+pages = {},
+title = {The Blending ToolKit: A simulation framework for evaluation of galaxy detection and deblending},
+volume = {8},
+journal = {The Open Journal of Astrophysics},
+doi = {10.33232/001c.129699}
 }
 ```

docs/source/install.rst

@@ -1,7 +1,7 @@
 Installation
 ===============
 
-*BlendingToolKit* (``btk``) uses `GalSim <https://github.com/GalSim-developers/GalSim>`_ to simulate galaxy images. The python version required for ``btk`` is ``python 3.9`` or higher. We currently do not support the latest python version ``python 3.13``.
+*BlendingToolKit* (``btk``) uses `GalSim <https://github.com/GalSim-developers/GalSim>`_ to simulate galaxy images. The python version required for ``btk`` is ``python 3.10`` or higher.
 The required packages for ``btk`` are:
 
 * astropy
@@ -33,8 +33,8 @@ Another option is to create a ``conda`` environment and install GalSim through `
 
 .. code-block::
 
-    conda create -n py39 python=3.9 anaconda
-    conda activate py39
+    conda create -n py313 python=3.13 anaconda
+    conda activate py313
     conda install -c conda-forge galsim
 
 For more details see `this link <https://galsim-developers.github.io/GalSim/_build/html/install_conda.html>`_.

pyproject.toml

@@ -14,10 +14,10 @@ authors = [
 ]
 maintainers = [{ name = "Ismael Mendoza", email = "[email protected]" }]
 classifiers = [
-  "Programming Language :: Python :: 3.9",
   "Programming Language :: Python :: 3.10",
   "Programming Language :: Python :: 3.11",
   "Programming Language :: Python :: 3.12",
+  "Programming Language :: Python :: 3.13",
   "License :: OSI Approved :: MIT License",
   "Operating System :: OS Independent",
 ]
@@ -27,7 +27,7 @@ license = { file = "LICENSE" }
 name = "blending_toolkit"
 readme = "README.md"
 version = "1.0.8"
-requires-python = ">=3.9,<3.13"
+requires-python = ">=3.10,<3.14"
 dependencies = [
   "galsim>=2.4.9",
   "sep>=1.4.0",
@@ -39,7 +39,7 @@ dependencies = [
   "h5py>=3.12.1",
   "tqdm>=4.67.1",
   "astropy>=5.1.0,<7.0.0",
-  "matplotlib>=3.7.0", # scarlet needs this
+  "matplotlib>=3.7.0",     # scarlet needs this
 ]
 
 [project.optional-dependencies]
@@ -55,21 +55,16 @@ dev = [
   "sphinx>=7.4.7",
   "sphinx-rtd-theme>=1.2.1",
 ]
-scarlet = [
-  "peigen>=0.0.9",
-  "autograd>=1.5.0",
-  "proxmin>=0.6.12",
-  "pybind11>=2.10.3",
-]
+scarlet = ["peigen>=0.0.9", "autograd>=1.5.0", "proxmin>=0.6.12", "pybind11>=2.10.3"]
 
 [project.urls]
-Homepage = "https://lsstdesc.org/BlendingToolKit/index.html"
-Repository = "https://github.com/LSSTDESC/BlendingToolKit"
+Homepage      = "https://lsstdesc.org/BlendingToolKit/index.html"
+Repository    = "https://github.com/LSSTDESC/BlendingToolKit"
 "Bug Tracker" = "https://github.com/LSSTDESC/BlendingToolKit/issues"
 
 
 [build-system]
-requires = ["setuptools>=61.0"]
+requires      = ["setuptools>=61.0"]
 build-backend = "setuptools.build_meta"
 
 [tool.setuptools]
@@ -107,7 +102,7 @@ exclude = [
 ]
 
 # Copying over black configuration
-line-length = 100
+line-length  = 100
 indent-width = 4
 
 # Assume Python 3.12
@@ -129,10 +124,10 @@ select = ["E", "F", "W", "I", "D", "PL", "RUF", "SIM", "RET"]
 # PLR2004: Magic value comparison is OK most of the time.
 # PLR0913: "Too many arguments in function definition", we should fix some of these eventually.
 # SIM118: Too many places where we use `k in table.keys()`, and table is not a dict.
-ignore = ["PLR2004", "PLR0913", "SIM118"]
+ignore = ["PLR2004", "PLR0913", "SIM118", "PLC0415"]
 
 # Allow fix for all enabled rules (when `--fix`) is provided.
-fixable = ["ALL"]
+fixable   = ["ALL"]
 unfixable = []
 
 # Allow unused variables when underscore-prefixed.
@@ -167,14 +162,14 @@ docstring-code-line-length = "dynamic"
 
 
 [tool.ruff.lint.per-file-ignores]
-"__init__.py" = ["E402", "I", "F"]
+"__init__.py"             = ["E402", "I", "F"]
 "**/{tests,docs,tools}/*" = ["E402", "D", "PLR0915"]
-"**/*.ipynb" = ["I"]
+"**/*.ipynb"              = ["I"]
 
 [tool.ruff.lint.pydocstyle]
 convention = "google"
 
 [tool.pytest.ini_options]
-addopts = "-ra"
+addopts    = "-ra"
 minversion = "6.0"
-testpaths = ["tests"]
+testpaths  = ["tests"]