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Release 1.10.1 #38

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Merged
rhpvorderman merged 4 commits into from
Feb 3, 2025
Merged

Release 1.10.1 #38

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a4e7b9b
Update version
rhpvorderman Jan 10, 2024
638c42b
Actually store IFS value
rhpvorderman Feb 3, 2025
ddaa4a6
Merge pull request #37 from LUMC/removetroublesomeline
rhpvorderman Feb 3, 2025
8412e8d
Create a new 1.10.1 release
rhpvorderman Feb 3, 2025
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4 changes: 4 additions & 0 deletions CHANGELOG.md
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Original file line number Diff line number Diff line change
@@ -1,3 +1,7 @@
version 1.10.1
------------------
+ Fix a bug that is caused by a wrong bash variable.

version 1.10.0
------------------
+ Fix crashing baseline when only unproductive sequences are present.
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2 changes: 1 addition & 1 deletion shm_csr.xml
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@@ -1,4 +1,4 @@
<tool id="shm_csr" name="SHM &amp; CSR pipeline" version="1.10.0" profile="16.04">
<tool id="shm_csr" name="SHM &amp; CSR pipeline" version="1.10.1" profile="16.04">
<description></description>
<requirements>
<requirement type="package" version="3.7.1">python</requirement>
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2 changes: 1 addition & 1 deletion wrapper.sh
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Expand Up @@ -837,7 +837,7 @@ mv $log $outdir/log.html
echo "<html><center><h1><a href='index.html'>Click here for the results</a></h1>Tip: Open it in a new tab (middle mouse button or right mouse button -> 'open in new tab' on the link above)<br />" > $log
echo "<table border = 1>" >> $log
echo "<thead><tr><th>Info</th><th>Sequences</th><th>Percentage</th></tr></thead>" >> $log
tIFS="$TMP"
tIFS="$IFS"
IFS=$'\t'
while read step seq perc
do
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