Skip to content

WIP: Add Histology, MicroCT, and Electrode Localization Pipelines #1294

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Draft
wants to merge 15 commits into
base: master
Choose a base branch
from

Merge branch 'master' into histology

feab74e
Select commit
Loading
Failed to load commit list.
Draft

WIP: Add Histology, MicroCT, and Electrode Localization Pipelines #1294

Merge branch 'master' into histology
feab74e
Select commit
Loading
Failed to load commit list.
Codecov / codecov/project failed Jul 7, 2025 in 1s

66.98% (-0.33%) compared to 1f4934a

View this Pull Request on Codecov

66.98% (-0.33%) compared to 1f4934a

Details

Codecov Report

Attention: Patch coverage is 8.82353% with 62 lines in your changes missing coverage. Please review.

Project coverage is 66.98%. Comparing base (1f4934a) to head (feab74e).

Files with missing lines Patch % Lines
src/spyglass/histology/v1/histology.py 0.00% 18 Missing ⚠️
src/spyglass/micro_ct/v1/micro_ct.py 0.00% 16 Missing ⚠️
...glass/electrode_localization/localization_merge.py 0.00% 12 Missing ⚠️
...rc/spyglass/electrode_localization/v1/histology.py 0.00% 8 Missing ⚠️
src/spyglass/electrode_localization/v1/micro_ct.py 0.00% 8 Missing ⚠️
Additional details and impacted files 
@@            Coverage Diff             @@
##           master    #1294      +/-   ##
==========================================
- Coverage   67.30%   66.98%   -0.33%     
==========================================
  Files          98      103       +5     
  Lines       12369    12436      +67     
==========================================
+ Hits         8325     8330       +5     
- Misses       4044     4106      +62

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:
  • ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.
View more details on Codecov