hwChan ordering with unrecorded channels

[samuelbray32]

Fixes #121

When making the list of hwChan as ordered in the binary stream, restrict to only channels included in the recording. This ensures proper indexing into the binary data

[Copilot]

Pull Request Overview

This PR ensures that the list of hardware channels (hwChan) is filtered to only those included in the recording, preserving correct indexing into the binary data.

• Extended _produce_ephys_channel_ids with parameters for recorded channel count and channel list, and added filtering logic.
• Updated _parse_header to gather hw_channels_recorded from the XML and pass it into the channel ID generator.
• Split the original numChannels attribute into num_chip_channels and num_ephy_channels, though both currently draw from the same source.

Comments suppressed due to low confidence (2)

src/trodes_to_nwb/spike_gadgets_raw_io.py:75

• Update the docstring to reflect the new parameters n_channels_recorded and hw_channels_recorded for clarity.

    def _produce_ephys_channel_ids(

src/trodes_to_nwb/spike_gadgets_raw_io.py:187

• num_chip_channels and num_ephy_channels are both assigned from the same XML attribute; verify if there is a distinct attribute for recorded channels to avoid misconfiguration.

        num_chip_channels = int(

[codecov]

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 89.38%. Comparing base (73e14e6) to head (e0bb9e6).
Report is 7 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #122      +/-   ##
==========================================
+ Coverage   89.32%   89.38%   +0.05%     
==========================================
  Files          12       12              
  Lines        1471     1479       +8     
==========================================
+ Hits         1314     1322       +8     
  Misses        157      157              

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.

🚀 New features to boost your workflow:

• ❄️ Test Analytics: Detect flaky tests, report on failures, and find test suite problems.

[rly]

I made some minor suggestions but otherwise looks good to me.