Search results

sc_trim_barcode problem in single-end data

Status: Open.

#138 In LuyiTian/scPipe;

· MiladAD123NGS opened on Dec 11, 2021

Read structure for CELseq protocol swaps R1 and R2

Status: Open.

#137 In LuyiTian/scPipe;

· mcmero opened on Sep 15, 2021

scater::calculateQCMetrics is deprepated

Status: Open.

#136 In LuyiTian/scPipe;

· bernt-matthias opened on Aug 28, 2021

automatically load biomaRt?

Status: Open.

#135 In LuyiTian/scPipe;

· bernt-matthias opened on Aug 27, 2021

sc-exon-mapping strand checking

Status: Open.

#134 In LuyiTian/scPipe;

· parsboy66 opened on Aug 9, 2021

sc_demultiplex empty output

Status: Open.

#131 In LuyiTian/scPipe;

· cpattaroni opened on Feb 1, 2021

Data processing for Smart-seq2 data

Status: Open.

#128 In LuyiTian/scPipe;

· arshiyaakeel opened on Oct 8, 2020

transcript ID not found

Status: Open.

#123 In LuyiTian/scPipe;

· AmaliT opened on Oct 27, 2019

All data (including example data) producing gene count matrix with 0s

Status: Open.

#122 In LuyiTian/scPipe;

· IzzyJRussell opened on Jul 10, 2019

gff3 gene ID replaced by random numbers in gene_count.csv table

Status: Open.

#121 In LuyiTian/scPipe;

· audreystott opened on Jul 3, 2019

Setting up a usage gallery

Status: Open.

#111 In LuyiTian/scPipe;

· LTLA opened on Mar 21, 2019

check bam tag in function

enhancement

Status: Open.

#107 In LuyiTian/scPipe;

· LuyiTian opened on Dec 18, 2018