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_extras/draco.md

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@@ -48,64 +48,3 @@ Just joking! You can either install the Windows Subystem for Linux (WSL) or **VS
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Then put in your password and you are in!
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## File structure
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As a best practice in bioinformatics, please number your directories on Draco and add meaningful headers. This makes it easy to trace where your data and outputs are later. An example of this directory numbering looks like below:
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```bash
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.
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├── 1.1_QC
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│ ├── 10_nanoplot
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│ │ ├── 20_nanoplot_summary_file
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│ │ ├── barcode62
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│ │ ├── barcode63
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│ │ └── barcode64
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│ └── 20_chopper
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├── 1.2_assembly
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│ ├── 10_results_assembly_flye
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│ │ ├── cross_assembly
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│ │ └── single_assemblies
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│ ├── 20_results_assessment_vclust
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│ │ ├── cross_assembly
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│ │ └── single_assemblies
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│ ├── 30_results_assessment_quast
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│ │ ├── cross_assembly
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│ │ └── single_assemblies
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│ └── 40_results_alignment_minimap2
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├── 1.3_virus_identification
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│ ├── 10_jaeger
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│ │ └── results_jaeger
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│ ├── 20_results_assessment_checkv
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│ │ ├── cross_assembly
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│ │ └── single_assemblies
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│ └── 40_results_filter_contigs
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├── 1.4_annotation
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│ ├── 10_pharokka
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│ │ ├── 11_selected_contig
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│ │ └── logs
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│ └── 20_plot_viral_genome
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├── 2.2_taxonomy
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│ ├── 10_vcontact_results
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│ └── 20_genomad_results
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│ └── assembly_annotate
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├── data
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│ ├── alignments
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│ │ ├── cross_assembly
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│ │ └── single_assemblies
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│ └── sequences
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├── py3env
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│ ├── bin
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│ ├── include
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│ ├── lib
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│ │ └── python3.9
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│ ├── lib64
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│ └── share
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│ └── man
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└── python_scripts
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├── annotation
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├── assembly
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├── host_prediction
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├── identify
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└── qc
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```

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