MPAS Version 8.3.1

This bugfix release corrects two issues in the MPAS-Atmosphere model:

• Fix a bug in the vertical interpolation of humidity for LBCs when first-guess
  levels are given in top-to-bottom order. Incorrect logic in the
  init_atm_case_lbc routine previously assumed that first-guess levels would be
  given in bottom-to-top order when attempting to vertically extrapolate to
  model levels below the lowest first-guess level, resulting in a copy of the
  vertically interpolated relative humidity at level k+1 to level k if levels
  were given in top-to-bottom order. This bug resulted in an unreasonably low
  water vapor mixing ratio field (lbc_qv) in LBC files. (PR #1335)

  NB: This bug is present in most older releases of MPAS, and it should be
  possible to cherry-pick the fix onto any branch or release based on MPAS
  v7.0 or later.

• Fix an issue with .F90 files in the src/core_atmosphere/physics/physics_mmm/
  directory not being re-compiled by updating the MMM-physics external tag to
  acquire a new Makefile.mpas file for MMM-physics. With the updated tag,
  compiling the atmosphere core, then making changes to any of the .F90 files
  in src/core_atmosphere/physics/physics_mmm/, then running make again (without
  first cleaning) leads to the modified .F90 files being correctly re-compiled.
  (PR #1337)