🧬 Translational Bioinformatics Analyst
🏥 Center of Spatial OMICs -- St. Jude Children's Research Hospital
🧪 Pharmaceutical Sciences degree
I work at the intersection of spatial omics, cancer biology, and translational reasoning.
My focus is not just statistical discovery, but mechanistic interpretation. I design reproducible computational workflows that integrate single-cell and spatial transcriptomics with therapeutic logic, clinical covariates, and biological coherence.
With training in Pharmaceutical Sciences and Biotechnology, I bring pathophysiology awareness and treatment-effect intuition into computational oncology research.
From study design to publication-ready figures, I’m your guy.
- Spatial transcriptomics (Visium, Xenium, CosMx, GeoMx, Phenocycler)
- Single-cell RNA-seq analysis
- Bulk RNA-seq analysis
- DNA methylation modeling (450k and EPIC Illumina array)
- Machine learning for biological phenotyping
- Treatment-response and stemness modeling
- Translational hypothesis generation
- Co-author -- Nature Biotechnology (Spatial transcriptomics reproducibility standards)
- Co-author -- Cell (STAMP multimodal spatial analysis framework)
- Multiple publications on machine learning--based stemness modeling in cancer
Languages and Frameworks: R, Python, Shell, Streamlit
Bioinformatics Packages & Toolkits:
Seurat, Scanpy, spacec, rapids-singlecell, scverse, SOPA, DESeq2, WGCNA, clusterProfiler, GSEA, minfi, caret,
randomForest, scikit-learn, STAR, CellRanger, SpaceRanger, FeatureCounts
Spatial Omics Platforms:
Visium, Xenium, CosMx, GeoMx, Phenocycler
Reproducibility & Workflow:
Git, GitHub, Conda, NextFlow, structured project architecture
Data Submission & Compliance:
GEO-compliant multi-omics dataset preparation and metadata
standardization
Management tools:
Notion, Clockify, Office tools, BioRender & Inkscape (Paper Figure Editing), BOX (data sharing), ChatGPT, Claude AI
- Team Lead -- St. Jude BioHackathon 2025\
- Intern Mentor -- Center of Spatial Omics\
- Poster Presenter -- Society for Neuro-Oncology\
- Contributor -- Space Hack 3.0
Developing toward a hybrid role combining:
- Lead bioinformatics infrastructure\
- Translational oncology strategy\
🔗 GitHub: https://github.com/Mmaycon
🔗 LinkedIn: https://github.com/Mmaycon
🔗 Publications: https://scholar.google.com/citations?user=ACk8bV4AAAAJ&hl=en
🔗 St. Jude, Dr. Plummer Team: https://www.stjude.org/research/labs/plummer-lab/plummer-lab-team.html
