Skip to content
Run Unit Tests

Using checkqc illumina parser for bclconvert #12

Sign in to view logs

Using checkqc illumina parser for bclconvert

Using checkqc illumina parser for bclconvert #12

Workflow file for this run

.github/workflows/unit_tests.yaml at c81ef18
name: Run Unit Tests
on: [push, pull_request]
jobs:
build:
runs-on: ubuntu-22.04
steps:
- uses: actions/checkout@v4
- name: Set up Python 3.13.1
uses: actions/setup-python@v4
with:
python-version: '3.13.1'
# checkQC currently only accepts python version between 3.10 and 3.11 but
# projman uses 3.13 thuis this is temporarily fixed here by cloning it
- name: Install dependencies
run: |
python3 -m pip install --upgrade pip
pip install -e . -r requirements_dev.txt
git clone https://github.com/Molmed/checkQC.git
- name: Launch tests
run: |
pytest tests/