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[FEATURE] Add CLAHE as an Optional Preprocessing Step

enhancementNew feature or requestNew feature or request

Status: Open.

#1376 In MouseLand/cellpose;

· xuefei-wang opened on Nov 27, 2025

Zarr 3 support for distributed

enhancementNew feature or requestNew feature or request

Status: Open.

#1375 In MouseLand/cellpose;

· felixS27 opened on Nov 27, 2025

[combine sam3]

enhancementNew feature or requestNew feature or request

Status: Open.

#1373 In MouseLand/cellpose;

· Nikolu716 opened on Nov 21, 2025

Batch Processing Not Implemented?

bugSomething isn't workingSomething isn't working

Status: Open.

#1372 In MouseLand/cellpose;

· shawn-conquest opened on Nov 18, 2025

Finetuning Cellpose-SAM

enhancementNew feature or requestNew feature or request

Status: Open.

#1353 In MouseLand/cellpose;

· licmn opened on Oct 23, 2025

[FEATURE] Checkpointing

enhancementNew feature or requestNew feature or request

Status: Open.

#1351 In MouseLand/cellpose;

· le1nax opened on Oct 20, 2025

[BUG] ROIs deleted after running CPSAM in v 4.0.8

bugSomething isn't workingSomething isn't working

Status: Open.

#1350 In MouseLand/cellpose;

· totoro7034 opened on Oct 19, 2025

[FEATURE] Does distributed_segmentation supports 2D-multi channel image?

enhancementNew feature or requestNew feature or request

Status: Open.

#1348 In MouseLand/cellpose;

· YueXia-natsu opened on Oct 16, 2025

[BUG] Shape mismatch between masks and output when segmenting z-stack slice-by-slice

bugSomething isn't workingSomething isn't working

Status: Open.

#1345 In MouseLand/cellpose;

· ElpadoCan opened on Oct 9, 2025

[BUG]Error saving new trained model

bugSomething isn't workingSomething isn't working

Status: Open.

#1343 In MouseLand/cellpose;

· Ge0rges opened on Oct 8, 2025

[BUG]can't support nvidia b200

bugSomething isn't workingSomething isn't working

Status: Open.

#1340 In MouseLand/cellpose;

· cmubioinformatics opened on Oct 7, 2025

[BUG] _reshape_norm() leading to unexpected array shape when using 3D arrays with one channel

bugSomething isn't workingSomething isn't working

Status: Open.

#1338 In MouseLand/cellpose;

· PandaGab opened on Oct 1, 2025