v2.0.0

• Added support for sources (individuals' indexes) for removing false positive matches (i.e. ones not occurring in any individual) in elastic-degenerate text.
• General source code quality improvements.
• Refactored Python scripts to use Python3.

v1.3.2

• Added end-to-end tests.

• Minor readme updates.

• Fixed processing maximum pattern count.

• Fixed Boost include in the Makefile.

• Added using default_value() from Boost for parameters.

• Removed using namespace std from headers.

• Improved comments in code.

v1.3.1

• Minor optimizations for data parsing.
• Minor parameter naming convention changes.
• Improved readme.

v1.3.0

• Added preliminary support for approximate matching based on the shift-add algorithm.
• Expanded unit tests.

v1.2.0

• Added unit tests.
• Changed dynamic to static linking in order to prevent missing library errors.

v1.1.0

• Changed the command-line interface in order to use command-line arguments rather than compile-time parameters.
• Improved readme.

v1.0.1

• Added help and version printing.
• Improved error messages for non-existent input files.
• Changed static to dynamic memory for segment variants.

Initial release

This is the initial release of the SOPanG tool for exact pattern matching over elastic-degenerate text.