Add Dockerfile and use conda rather than pixi env definitions

binder/Dockerfile

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+# Inherit from a JupyterHub compatible Docker image
+FROM quay.io/jupyter/base-notebook:2025-09-08
+
+RUN echo ${NB_UID}
+# Add conda packages
+COPY binder/environment.yml /tmp/environment.yml
+RUN mamba env update --prefix ${CONDA_DIR} --file /tmp/environment.yml
+
+COPY binder/apt.txt /tmp/apt.txt
+
+USER root
+
+RUN apt-get update && \
+    xargs -a /tmp/apt.txt apt install -y && \
+    apt-get autoremove -y && \
+    apt-get autoclean && \
+    rm -rf /var/lib/apt/lists/* && \
+    rm /tmp/apt.txt
+
+# Install quarto
+USER root
+RUN wget -q https://github.com/quarto-dev/quarto-cli/releases/download/v1.5.57/quarto-1.5.57-linux-amd64.deb
+RUN dpkg -i quarto-1.5.57-linux-amd64.deb
+
+RUN curl "https://awscli.amazonaws.com/awscli-exe-linux-x86_64.zip" -o "awscliv2.zip" && \
+    unzip awscliv2.zip && \
+    ./aws/install
+
+USER ${NB_UID}
+

binder/apt.txt

@@ -0,0 +1,9 @@
+binutils
+htop
+tree
+tar
+zip
+unzip
+less
+nano
+vim

binder/environment.yml

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+name: base-env
+channels:
+  - conda-forge
+  - nodefaults
+dependencies:
+  # Workshop dependencies
+  - python>=3.11
+  - jupyter>=1.1.1,<2
+  - rasterio>=1.4.3,<2
+  - rioxarray
+  - xarray=2025.09.0
+  - virtualizarr=2.1.2
+  - zarr=3.1.2
+  - ipykernel>=6.29.5,<7
+  - pip>=25.1.1,<26
+  - icechunk>=1.0.0,<2
+  - h5py>=3.14.0,<4
+  - earthaccess>=0.12.0,<0.13
+  - cftime>=1.6.4,<2
+  - jupyterlab>=4.4.6,<5
+  - xstac>=1.2.0,<2
+  - shapely>=2.1.1,<3
+  - rustac>=0.8.1,<0.9
+  # For development
+  - wget
+  - curl
+  - gcc
+  - make
+  - memray
+  - jupyter
+  - pip
+  - pipx
+  - uv
+  - pixi
+  - pre-commit
+  - pytest
+  - pytest-cov
+  - pytest-env
+  - pytest-xdist
+  - pytest-timeout
+  # For development on the Hub
+  - git
+  - gh
+  - code-server
+  - jupyter-resource-usage
+  - jupyter-vscode-proxy
+  - openssh
+  # For building the quarto book
+  - jupytext
+  - pip:
+    # For development on the Hub
+    - gh-scoped-creds
+    - jupyter-sshd-proxy
+    - jupyterlab-bxplorer
+