PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix dcite: <https://schema.datacite.org/meta/kernel-4.6/metadata.xsd#>
prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/>
prefix zenodocomm: <https://zenodo.org/communities/>
prefix sio: <http://semanticscience.org/resource/>SELECT ?graph (count(?subject) as ?number_of_triples)
WHERE {
graph ?graph { ?subject ?predicate ?object }
}
group by ?graphPREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix dcite: <https://schema.datacite.org/meta/kernel-4.6/metadata.xsd#>
select ?s ?p ?plabel ?o ?olabel where
{
?s ?p ?o
optional {
?p rdfs:label ?plabel.
}
optional {
?o rdfs:label ?olabel .
}
}
limit 10PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix dcite: <https://schema.datacite.org/meta/kernel-4.6/metadata.xsd#>
prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/>
select *
where
{
<https://doi.org/10.5281/zenodo.14013026> dcite:creator ?creator .
?creator dcite:givenName ?creator_given_name ;
dcite:familyName ?creator_family_name .
?creator dcite:affiliation ?affiliation .
filter(isiri(?affiliation))
?affiliation rdfs:label ?affiliation_name .
}
limit 40| creator | creator_given_name | creator_family_name | affiliation | affiliation_name |
|---|---|---|---|---|
| https://orcid.org/0000-0001-9568-895X | Christian | Schmidt | https://ror.org/0546hnb39 | University of Konstanz |
| https://orcid.org/0000-0001-9568-895X | Christian | Schmidt | https://ror.org/04cdgtt98 | German Cancer Research Center |
| https://orcid.org/0000-0001-9568-895X | Christian | Christian Schmidt | https://ror.org/0546hnb39 | University of Konstanz |
| https://orcid.org/0000-0001-9568-895X | Christian | Christian Schmidt | https://ror.org/04cdgtt98 | German Cancer Research Center |
| https://orcid.org/0000-0001-7734-3771 | Stefanie | Stefanie Weidtkamp-Peters | https://ror.org/01vnkaz16 | NFDI4BIOIMAGE |
| https://orcid.org/0000-0001-7734-3771 | Stefanie | Stefanie Weidtkamp-Peters | https://ror.org/024z2rq82 | Heinrich Heine University Düsseldorf |
| https://orcid.org/0000-0001-7734-3771 | Stefanie | Weidtkamp-Peters | https://ror.org/01vnkaz16 | NFDI4BIOIMAGE |
| https://orcid.org/0000-0001-7734-3771 | Stefanie | Weidtkamp-Peters | https://ror.org/024z2rq82 | Heinrich Heine University Düsseldorf |
| https://orcid.org/0000-0001-6523-7496 | Susanne | Kunis | https://ror.org/04qmmjx98 | Osnabrück University |
| b0 | Tom | Boissonnet | https://ror.org/024z2rq82 | Heinrich Heine University Düsseldorf |
| b1 | Bettina | Hagen | https://ror.org/04xx1tc24 | Max Planck Institute for Biology of Ageing |
Some records must have the full name set as ‘family name’.
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix dcite: <https://schema.datacite.org/meta/kernel-4.6/metadata.xsd#>
prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/>
select *
where
{
<https://orcid.org/0000-0001-7734-3771> dcite:givenName ?first;
dcite:familyName ?last .
}| first | last |
|---|---|
| Stefanie | Stefanie Weidtkamp-Peters |
| Stefanie | Weidtkamp-Peters |
<<prefixes>>
select (count(?record) as ?records) where {
graph <https://kg.nfdi4bioimage.de/n4bikg/n4bi_zenodo_community> { <https://zenodo.org/communities/nfdi4bioimage> <http://semanticscience.org/resource/SIO_000088> ?record}
}
limit 10| records |
|---|
| 261 |
PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix dcite: <https://schema.datacite.org/meta/kernel-4.6/metadata.xsd#>
prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/>
prefix zenodocomm: <https://zenodo.org/communities/>
prefix sio: <http://semanticscience.org/resource/>
select distinct ?record where
{
?record dcite:creator ?creator .
}PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix dcite: <https://schema.datacite.org/meta/kernel-4.6/metadata.xsd#>
prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/>
select ?record (count(distinct ?creator) as ?ncreators) (count(distinct ?contributor) as ?ncontributor)
where
{
?record dcite:contributor ?contributor ;
dcite:creator ?creator .
}
group by ?recordPREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix dcite: <https://schema.datacite.org/meta/kernel-4.6/metadata.xsd#>
prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/>
select ?institution (count(distinct ?record) as ?nrecords)
where
{
?record dcite:creator ?creator .
?creator dcite:affiliation ?institution .
filter(isiri(?institution))
}
group by ?institution
order by desc(?nrecords)PREFIX owl: <http://www.w3.org/2002/07/owl#>
PREFIX rdfs: <http://www.w3.org/2000/01/rdf-schema#>
PREFIX rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#>
prefix dcite: <https://schema.datacite.org/meta/kernel-4.6/metadata.xsd#>
prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/>
select ?creator (count(distinct ?record) as ?nrecords)
where
{
?record dcite:creator ?creator .
?creator dcite:familyName ?name .
}
group by ?creator
order by desc(?nrecords)<<prefixes>>
prefix omecore: <https://ld.openmicroscopy.org/core/>
select * where {
graph n4bikg:services {
?omero dcat:accesURL ?sparql_endpoint_url .
}
}| omero | sparql_endpoint_url |
|---|---|
| https://omero-nfdi.uni-muenster.de | https://omero-nfdi.uni-muenster.de/vkg/sparql |
| https://evolomero.evolbio.mpg.de | https://evolomero.evolbio.mpg.de/vkg/sparql |
service <https://evolomero.evolbio.mpg.de/vkg/sparql> {
?img a omecore:Image .
}
# }
# }prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/NFDI_>
select ?g ?s ?p ?o where {
graph ?g {?s ?p ?o}
values ?g {
<https://kg.nfdi4bioimage.de/n4bikg/core>
<https://kg.nfdi4bioimage.de/n4bikg/services>
<https://kg.nfdi4bioimage.de/n4bikg/n4bi_zenodo_community>
}
bind(concat(str(?p), str(?o)) as ?spo)
filter(contains(?spo, str(nfdicore:)))
}nfdicore = Graph()
nfdicore.parse("https://ise-fizkarlsruhe.github.io/nfdicore/ontology.ttl")
# Check properties
object_properties = nfdicore.query("select ?p where {?p a owl:ObjectProperty. }").serialize(format='csv').decode('utf8').split("\r\n")[1:]
for test_prop in [
"https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000201",
"https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000195",
"https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0001008"]:
print(test_prop, test_prop in object_properties)
classes = nfdicore.query("select ?p where {?p a owl:Class. }").serialize(format='csv').decode('utf8').split("\r\n")[1:]
print("https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000001", "https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000001" in classes)select * where {
<https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000201> ?prop ?val .
}| prop | val |
|---|---|
| http://www.w3.org/1999/02/22-rdf-syntax-ns#type | http://www.w3.org/2002/07/owl#ObjectProperty |
| http://www.w3.org/2000/01/rdf-schema#label | has sparql endpoint |
| http://www.w3.org/2000/01/rdf-schema#comment | The property relates a data resource to its SPARQL Endpoint. |
| http://www.w3.org/2000/01/rdf-schema#subPropertyOf | https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000226 |
| https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000012 | sparqlEndpoint |
| http://www.w3.org/2002/07/owl#inverseOf | https://nfdi.fiz-karlsruhe.de/ontology/NFDI_0000202 |
arq --data https://ise-fizkarlsruhe.github.io/nfdicore/ontology.ttl "
prefix nfdicore: <https://nfdi.fiz-karlsruhe.de/ontology/NFDI_>
prefix owl: <http://www.w3.org/2002/07/owl#>
prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#>
select * where {
?prop a owl:ObjectProperty .
?prop rdfs:label ?label .
filter(contains(?label, \"sparql\"))
} "no alternative in nfdi core. looking up ols, returns dcat:acessURL
<<prefixes>>
prefix n4bikg: <https://kg.nfdi4bioimage.de/n4bikg/>
prefix dcat: <http://www.w3.org/ns/dcat#>
delete { graph n4bikg:services {?s nfdicore:NFDI_0000201 ?val}}
insert {graph n4bikg:services {?s dcat:accesURL ?val}}
where {
graph n4bikg:services {?s nfdicore:NFDI_0000201 ?val} .
}- affected graph: n4bi_zenodo_community
- affected terms
prefix n4bikg: <https://kg.nfdi4bioimage.de/n4bikg/>
prefix dcat: <http://www.w3.org/ns/dcat#>
PREFIX schema: <http://schema.org/><<prefixes>>
select * where {
{
graph n4bikg:n4bi_zenodo_community {?s nfdicore:NFDI_0000195 ?o}
}
union {
graph n4bikg:owl { nfdicore:NFDI_0000195 rdfs:label ?label195}
}
}| s | o | label195 |
|---|---|---|
| https://nfdi4bioimage.de/rdf/node | https://zenodo.org/communities/nfdi4bioimage | |
| represents collection |
will replace by (zenodo_communit provo:wasAttributedTo n4bi)
<<prefixes>>
prefix prov <https://www.w3.org/TR/prov-o/#>
delete {
graph n4bikg:n4bi_zenodo_community {?s nfdicore:NFDI_0000195 ?collection}
}
insert {
graph n4bikg:n4bi_zenodo_community {?collection prov:wasAttributedTo ?s;
a prov:Collection .}
}
where {
graph n4bikg:n4bi_zenodo_community {?s nfdicore:NFDI_0000195 ?collection}
}
<<prefixes>>
prefix prov: <https://www.w3.org/TR/prov-o/#>
select * where {
optional
{
graph n4bikg:n4bi_zenodo_community {?s nfdicore:NFDI_0000195 ?collection}
}
optional {
graph n4bikg:n4bi_zenodo_community {?s ^prov:wasAttributedTo ?collection .
?collection ?prop ?val .}
}
}- affected graph: n4bi_zenodo_community
- affected terms
<<prefixes>>
select * where {
{
graph n4bikg:n4bi_zenodo_community {?s nfdicore:NFDI_0001008 ?o}
}
union {
graph n4bikg:owl { nfdicore:NFDI_0001008 rdfs:label ?label }
}
}| s | o | label |
|---|---|---|
| https://zenodo.org/communities/nfdi4bioimage | https://zenodo.org/communities/nfdi4bioimage | |
| has url |
will replace by (zenodo_communit provo:wasAttributedTo n4bi)
<<prefixes>>
prefix prov <https://www.w3.org/TR/prov-o/#>
delete {
graph n4bikg:n4bi_zenodo_community {?s nfdicore:NFDI_0001008 ?o}
}
insert {
graph n4bikg:n4bi_zenodo_community {?s schema:url ?s .}
}
where {
graph n4bikg:n4bi_zenodo_community {?s nfdicore:NFDI_0001008 ?o}
}<<prefixes>>
select * where {
optional
{
graph n4bikg:n4bi_zenodo_community {?s nfdicore:NFDI_0001080 ?o}
}
optional {
graph n4bikg:n4bi_zenodo_community {?s schema:url ?o .}
}
}| s | o |
|---|---|
| https://zenodo.org/communities/nfdi4bioimage | https://zenodo.org/communities/nfdi4bioimage |
wget -O RDF_dumps/nfdicore-3.0.5.ttl https://ise-fizkarlsruhe.github.io/nfdicore/ontology.ttl
wget -O RDF_dumps/construct {?s ?p ?o} where {graph ?g {?s ?p ?o}}Parse error: Encountered ” <VAR1> “?o “” at line 1, column 21. ]] PREFIX adms: http://www.w3.org/ns/adms# PREFIX bibo: http://purl.org/ontology/bibo/ PREFIX core: https://ld.openmicroscopy.org/core/ PREFIX datacite: https://schema.datacite.org/meta/kernel-4.6/metadata.xsd# PREFIX dc: http://purl.org/dc/elements/1.1/ PREFIX dcite: https://schema.datacite.org/meta/kernel-4.6/metadata.xsd# PREFIX dcterms: http://purl.org/dc/terms/ PREFIX doap: http://usefulinc.com/ns/doap# PREFIX edam: http://purl.obolibrary.org/obo/edam# PREFIX edamontology: http://edamontology.org/ PREFIX foaf: http://xmlns.com/foaf/0.1/ PREFIX linkml: https://w3id.org/linkml/ PREFIX ncit: http://purl.obolibrary.org/obo/NCIT_ PREFIX nfdicore: https://nfdi.fiz-karlsruhe.de/ontology/ PREFIX obo: http://purl.obolibrary.org/obo/ PREFIX oboInOwl: http://www.geneontology.org/formats/oboInOwl# PREFIX ontology: https://nfdi.fiz-karlsruhe.de/ontology/ PREFIX orcid: https://orcid.org/ PREFIX owl: http://www.w3.org/2002/07/owl# PREFIX rdf: http://www.w3.org/1999/02/22-rdf-syntax-ns# PREFIX rdfs: http://www.w3.org/2000/01/rdf-schema# PREFIX ror: https://ror.org/ PREFIX sio: http://semanticscience.org/resource/ PREFIX skos: http://www.w3.org/2004/02/skos/core# PREFIX t4fs: http://purl.obolibrary.org/obo/T4FS_ PREFIX terms: http://purl.org/dc/terms/ PREFIX vann: http://purl.org/vocab/vann/ PREFIX wd: http://www.wikidata.org/entity/ PREFIX wdt: http://www.wikidata.org/prop/direct/ PREFIX xml: http://www.w3.org/XML/1998/namespace PREFIX xo: http://rhizomik.net/redefer/xsl/xsd2owl-functions.xsl PREFIX xs: http://www.w3.org/2001/XMLSchema# PREFIX xsd: http://www.w3.org/2001/XMLSchema# PREFIX xsi: http://www.w3.org/2001/XMLSchema-instance# PREFIX zenodo: https://zenodo.org/ns/ ]]
After each update operation, all graphs should be dumped and git committed to serve as a starting point for the next round of updates.construct {?s ?p ?o} where {
graph $graph {?s ?p ?o}
}
construct {?s ?p ?o} where {
graph $graph {?s ?p ?o}
}
Changes not staged for commit: (use “git add <file>…” to update what will be committed) (use “git restore <file>…” to discard changes in working directory) modified: README.org
no changes added to commit (use “git add” and/or “git commit -a”) [main e2660a8] Archiving graphs. 1 file changed, 49 insertions(+), 26 deletions(-)
dcat:accesURL should be dcat:accessURL
construct {?s ?p ?o} where {
graph $graph {?s ?p ?o}
}git add Archive/*.n3
git commit -m "Archiving graphs."Changes not staged for commit: (use “git add <file>…” to update what will be committed) (use “git restore <file>…” to discard changes in working directory) modified: README.org
no changes added to commit (use “git add” and/or “git commit -a”) [main e2660a8] Archiving graphs. 1 file changed, 49 insertions(+), 26 deletions(-)
dcat:accesURL should be dcat:accessURL
still an issue?
<<prefixes>>
ask where {
?service dcat:accessURL ?url
}| _askResult |
|---|
| false |
apparently not. Check sparq:sparqlService and sparql:sparqlEndpoint
prefix n4bikg: <https://kg.nfdi4bioimage.de/n4bikg/>
prefix sparql: <http://www.w3.org/ns/sparql-service-description#>
select * where {
graph n4bikg:services {?service a sparql:Service;
sparql:endpoint ?endpoint } .
} | service | endpoint |
|---|---|
| https://evolomero.evolbio.mpg.de/vkg | https://evolomero.evolbio.mpg.de/vkg/sparql |
| https://omero.nfdi4bioimage.de/vkg | https://omero.nfdi4bioimage.de/vkg/sparql |
ok, no issue any longer
but let’s add those prefixes
prefix n4bikg: <https://kg.nfdi4bioimage.de/n4bikg/>
prefix sparql: <http://www.w3.org/ns/sparql-service-description#>prefix ror: <https://ror.org/>
prefix obo: <http://purl.obolibrary.org/obo/><<prefixes>>
select distinct ?affiliation ?affiliation_label where {
?affiliation a ?ro ;
rdfs:label ?affiliation_label .
values ?ro { obo:OBI_0000245 obo:OBI_0000828}
}| affiliation | affiliation_label | |
|---|---|---|
| https://ror.org/042aqky30 | TU Dresden | |
| https://ror.org/042aqky30 | TU Dresden | |
| https://ror.org/03s7gtk40 | Leipzig University | |
| https://ror.org/03s7gtk40 | Leipzig University | |
| https://ror.org/05tpnw772 | German BioImaging – Gesellschaft für Mikroskopie und Bildanalyse | |
| https://ror.org/05tpnw772 | German BioImaging – Gesellschaft für Mikroskopie und Bildanalyse | |
| https://ror.org/0546hnb39 | University of Konstanz | |
| https://ror.org/0546hnb39 | University of Konstanz | |
| https://ror.org/04cdgtt98 | German Cancer Research Center | |
| https://ror.org/04cdgtt98 | German Cancer Research Center | |
| https://ror.org/024z2rq82 | Heinrich Heine University Düsseldorf | |
| https://ror.org/024z2rq82 | University of Düsseldorf | |
| https://ror.org/04c4bwh63 | Cologne Excellence Cluster on Cellular Stress Responses in Aging Associated Diseases | |
| https://ror.org/00rcxh774 | University of Cologne | |
| https://ror.org/00rcxh774 | University of Cologne | |
| https://ror.org/000h6jb29 | Helmholtz Centre for Environmental Research | |
| https://ror.org/000h6jb29 | Helmholtz Centre for Environmental Research | |
| https://ror.org/038t36y30 | Heidelberg University | |
| https://ror.org/038t36y30 | Heidelberg University | |
| https://ror.org/023b0x485 | Johannes Gutenberg University Mainz | |
| https://ror.org/023b0x485 | Johannes Gutenberg University Mainz | |
| https://ror.org/034waa237 | Cluster of Excellence on Plant Sciences | |
| https://ror.org/04qmmjx98 | Osnabrück University | |
| https://ror.org/04qmmjx98 | Osnabrück University | |
| https://ror.org/0245cg223 | University of Freiburg | |
| https://ror.org/0245cg223 | University of Freiburg | |
| https://ror.org/05d78xc36 | Euro-BioImaging ERIC | |
| https://ror.org/00pd74e08 | University of Münster | |
| https://ror.org/00pd74e08 | University of Münster | |
| https://ror.org/013czdx64 | University Hospital Heidelberg | |
| https://ror.org/0534re684 | Max Planck Institute for Evolutionary Biology | |
| https://ror.org/0534re684 | Max Planck Institute for Evolutionary Biology | |
| https://ror.org/04v4h0v24 | Helmholtz Metadata Collaboration | |
| https://ror.org/05wwzbv21 | NFDI4Chem | |
| https://ror.org/055s37c97 | Leibniz-Institut für Naturstoff-Forschung und Infektionsbiologie e. V. - Hans-Knöll-Institut (HKI) | |
| https://ror.org/055s37c97 | Leibniz Institute for Natural Product Research and Infection Biology | |
| https://ror.org/03a4sp974 | NFDI4Microbiota | |
| https://ror.org/01f5dqg10 | NFDI4Earth | |
| https://ror.org/00r0qs524 | FAIRAgro | |
| https://ror.org/05nfk7108 | German Human Genome-Phenome Archive | |
| https://ror.org/03fqpzb44 | NFDI4Biodiversity | |
| https://ror.org/0305k8y39 | NFDI4Health | |
| https://ror.org/01zwmgk08 | Leibniz Institute for Neurobiology | |
| https://ror.org/01zwmgk08 | Leibniz Institute for Neurobiology | |
| https://ror.org/01v7r4v08 | DataPLANT | |
| https://ror.org/004hd5y14 | Leibniz Institute for Plasma Science and Technology | |
| https://ror.org/004hd5y14 | Leibniz Institute for Plasma Science and Technology | |
| https://ror.org/0030f2a11 | Universitätsklinikum Erlangen | |
| https://ror.org/02nv7yv05 | Forschungszentrum Jülich | |
| https://ror.org/02nv7yv05 | Forschungszentrum Jülich | |
| https://ror.org/02s376052 | École Polytechnique Fédérale de Lausanne | |
| https://ror.org/04ers2y35 | University of Bremen | |
| https://ror.org/04xx1tc24 | Max Planck Institute for Biology of Ageing | |
| https://ror.org/02se0t636 | Leibniz Institute of Photonic Technology | |
| https://ror.org/02se0t636 | Leibniz Institute of Photonic Technology | |
| https://ror.org/02h2x0161 | GEOMAR Helmholtz Centre for Ocean Research Kiel | |
| https://ror.org/03h2bxq36 | University of Dundee | |
| https://ror.org/014nnvj65 | TH Köln - University of Applied Sciences | |
| https://ror.org/02catss52 | European Bioinformatics Institute | |
| https://ror.org/05qpz1x62 | Friedrich Schiller University Jena | |
| https://ror.org/05qj6w324 | Nationale Forschungsdateninfrastruktur | |
| https://ror.org/05mxhda18 | University Hospital Cologne | |
| https://ror.org/05745n787 | Niedersächsische Staats-und Universitätsbibliothek Göttingen | |
| https://ror.org/04mz5ra38 | University of Duisburg-Essen | |
| https://ror.org/03mstc592 | European Molecular Biology Laboratory | |
| https://ror.org/03mstc592 | European Molecular Biology Laboratory | |
| https://ror.org/03av75f26 | Max Planck Institute for Multidisciplinary Sciences | |
| https://ror.org/03a1kwz48 | University of Tübingen | |
| https://ror.org/0327sr118 | DIPF | Leibniz Institute for Research and Information in Education |
| https://ror.org/02jhqqg57 | Leibniz Institute for Analytical Sciences - ISAS | |
| https://ror.org/02jhqqg57 | Leibniz Institute for Analytical Sciences - ISAS | |
| https://ror.org/02778hg05 | Universität Trier | |
| https://ror.org/0259fwx54 | ZB MED - Information Centre for Life Sciences | |
| https://ror.org/01zjc6908 | European Molecular Biology Laboratory | |
| https://ror.org/01y9bpm73 | University of Göttingen | |
| https://ror.org/01y9bpm73 | University of Göttingen | |
| https://ror.org/01k97gp34 | TU Dortmund University | |
| https://ror.org/01k8bwd50 | NFDI4Immuno | |
| https://ror.org/00vn06n10 | Simula Research Laboratory | |
| https://ror.org/00v34f693 | Quantitative Biology Center | |
| https://ror.org/00ggpsq73 | Otto-von-Guericke University Magdeburg | |
| https://ror.org/01t4ttr56 | Center for Scalable Data Analytics and Artificial Intelligence | |
| https://ror.org/001jhv750 | NFDI4Culture | |
| https://ror.org/04tsk2644 | Ruhr University Bochum | |
| b0 | Institute of Neurosciences and Medicine (INM-1), Forschungszentrum Jülich | |
| b1 | Helmholtz Centre for Environmental Research GmbH - UFZ | |
| b2 | Heinrich-Heine-University Düsseldorf | |
| b3 | Technische Universität Dresden | |
| b4 | Biomedical Computer Vision Group, Heidelberg University, BioQuant | |
| b5 | Single-cell Open Lab, German Cancer Research Center (DKFZ), Heidelberg, Germany | |
| b6 | EMBL Heidelberg | |
| b7 | Division of Chromatin Networks, German Cancer Research Center (DKFZ) and Bioquant, Heidelberg, Germany | |
| b8 | Cologne Excellence Cluster on Cellular Stress Responses in Aging-Associated Diseases (CECAD), University of Cologne, Cologne, Germany | |
| b9 | Regional Computing Centre (RRZK/ITCC), University of Cologne, Cologne, Germany | |
| b10 | Helmholtz Center of Environmental Research - UFZ | |
| b11 | Combinatorial NeuroImaging Core Facility, Leibniz Institute for Neurobiology, Magdeburg, Germany | |
| b12 | Münster Imaging Network, Cells in Motion Interfaculty Centre, University of Münster | |
| b13 | Helmholtz Imaging | |
| b14 | Imaging Facility, Cellular Stress Responses in Aging-Associated Diseases (CECAD), Cologne, University of Cologne, Germany | |
| b15 | Regional Computer Center (RRZK), University of Cologne, Cologne, Germany | |
| b16 | Technical University of Dresden | |
| b17 | Deutsches Krebsforschungszentrum | |
| b18 | German BioImaging - Society for Microscopy and Image Analysis | |
| b19 | Department of Computer Science, University of Freiburg | |
| b20 | Academy of Sciences and Literature, Mainz, Germany | |
| b21 | Johannes Gutenberg University Mainz | |
| b22 | ScaDS.AI | |
| b23 | University of Münster | |
| b24 | ZIK Plasmatis, Leibniz Institute for Plasma Science and Technology, Greifswald, Germany | |
| b25 | Molecular Biophysics, B CUBE - Center for Molecular and Cellular Bioengineering, Technical University Dresden, Germany | |
| b26 | European Molecular Biology Laboratory (EMBL) | |
| b27 | Technische Universität Dresden, Germany | |
| b28 | Leibniz Institute for Neurobiology, Magdeburg, Germany | |
| b29 | Department of Computer Science, University of Freiburg, Freiburg im Breisgau | |
| b30 | Simula Research Laboratory | |
| b31 | Hopp-Children’s Cancer Center Heidelberg (KiTZ), Heidelberg, Germany. Division of Pediatric Neuro-oncology, German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany. Department of Pediatric Oncology, Hematology, and Immunology, Heidelberg University Hospital; Heidelberg; Germany | |
| b32 | Deutsches Dokumentationszentrum für Kunstgeschichte - Bildarchiv Foto Marburg, Marburg University | |
| b33 | Helmholtz Metadata Collaboration (HMC) Hub Health | |
| b34 | Institute of Microbiology, Heinrich Heine University Düsseldorf, Germany | |
| b35 | Center for Advanced Imaging, Heinrich-Heine-Universität Düsseldorf, Düsseldorf, Germany | |
| b36 | General Microbiology, Technical University Dresden, Germany | |
| b37 | Data-Driven Imaging in Medicine, University of Applied Sciences and Arts, Göttingen, Germany | |
| b38 | EMBL | |
| b39 | Center for Regenerative Therapies Dresden (CRTD) | |
| b40 | German Cancer Research Center (DKFZ) | |
| b41 | NFDI4BioImage | |
| b42 | German BioImaging – Gesellschaft für Mikroskopie und Bildanalyse e.V., Konstanz, Germany | |
| b43 | German BioImaging e.V Society for Microscopy and Image Analysis Konstanz, Germany | |
| b44 | German BioImaging e.V. | |
| b45 | German BioImaging—Society for Microscopy and Image Analysis e.V., Constance, Germany | |
| b46 | German Cancer Research Center (DKFZ), Department Enabling Technology, Heidelberg, Germany | |
| b47 | Universität Konstanz | |
| b48 | Riccardo | |
| b49 | Helmholtz-Zentrum für Umweltforschung UFZ, Leipzig | |
| b50 | Umweltforschungszentrum Leipzig | |
| b51 | Helmholtz Centre for Environmental Research (UFZ), Leipzig, Germany | |
| b52 | Heinrich-Heine University of Düsseldorf, Center for Advanced Imaging, Düsseldorf, Germany | |
| b53 | Heinrich-Heine-University Düsseldorf, Center for Advanced Imaging | |
| b54 | Heinrich Heine Universität Düsseldorf | |
| b55 | NFDI4BIOIMAGE | |
| b56 | B CUBE, TU Dresden | |
| b57 | University Münster | |
| b58 | Muenster Imaging Network, University of Muenster, Muenster, Germany | |
| b59 | Exzellenzcluster CECAD in der Universität zu Köln | |
| b60 | Heinrich Heine Institut | |
| b61 | Regional Computing Centre (RRZK), University of Cologne | |
| b62 | INP Greifswald | |
| b63 | Max-Planck-Institute for Evolutionary Biology | |
| b64 | German Cancer Research Center (DKFZ), Department Enabling Technology, Heidelberg, Germany | |
| b65 | German BioImaging - Gesellschaft für Mikroskopie und Bildanalyse e.V. | |
| b66 | Department of Biology/Chemistry Center for Cellular Nanoanalytics, University of Osnabrück, Germany | |
| b67 | University Osnabrück | |
| b68 | Department of Biology/Chemistry Center for Cellular Nanoanalytics University Osnabrück, Germany | |
| https://ror.org/050589e39 | European Molecular Biology Laboratory | |
| b69 | University of Amsterdam | |
| b70 | Nationale Forschungsdateninfrastruktur (NFDI) e.V. | |
| b71 | Jan | |
| b72 | University of Mainz, High Performance Computing Group, Mainz, Germany | |
| b73 | Euro-BioImaging ERIC Bio-Hub | |
| b74 | Albert-Ludwigs-Universität Freiburg, Germany | |
| b75 | Data Science and Management & Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne, Cologne, Germany | |
| b76 | Data Science and Management, Cluster of Excellence on Plant Sciences (CEPLAS), University of Cologne | |
| b77 | Leibniz Institute for Neurobiology (LIN), Magdeburg, Germany | |
| b78 | Rostock University Medical Center | |
| b79 | German BioImaging - Society for Microscopy and Image Analysis e.V., Konstanz, Germany | |
| b80 | Big Data Analytics Working Group, Forschungszentrum Jülich, Germany | |
| b81 | Stefan | |
| b82 | Wibke | |
| b83 | Institute of Neuroscience and Medicine (INM-1), Forschungszentrum Jülich, Germany | |
| https://ror.org/05grdyy37 | Amsterdam University Medical Centers | |
| b84 | Micelio, Belgium | |
| b85 | Micelio | |
| b86 | Uni Bremen | |
| https://ror.org/02skbsp27 | Leibniz Institute of Plant Genetics and Crop Plant Research | |
| https://ror.org/01ygyzs83 | Leibniz Centre for Agricultural Landscape Research | |
| b87 | Department of Biology/Chemistry and Center for Cellular Nanoanalytics, University Osnabrück, Germany | |
| https://ror.org/013meh722 | University of Cambridge | |
| b88 | University of Heidelberg | |
| b89 | École Polytechnique Fédérale de Lausanne | |
| b90 | Thomas | |
| https://ror.org/04zrf7b53 | University of Kaiserslautern | |
| b91 | Rheinland-Pfälzische Technische Universität Kaiserslautern-Landau, Germany | |
| b92 | Center for Molecular Medicine Cologne and CECAD Research Center, University of Cologne, Cologne, Germany | |
| b93 | Computational Systems Biology, University of Kaiserslautern-Landau, Kaiserslautern, Germany | |
| b94 | Institute of Data Science, University of Greifswald | |
| b95 | Medical Informatics Laboratory, University Medicine Greifswald | |
| b96 | ZALF e. V. | |
| b97 | Leibniz Institute for Natural Product Research and Infection Biology - Hans Knöll Institute, Friedrich Schiller University Jena, Germany | |
| b98 | Leiden University | |
| b99 | Leiden Institute of Advanced Computer Science, The Netherlands | |
| b100 | come2data | |
| https://ror.org/032e6b942 | Alfred-Wegener-Institut Helmholtz-Zentrum für Polar- und Meeresforschung | |
| https://ror.org/02yrs2n53 | Constructor University | |
| b101 | Saxon State and University Library Dresden, Dresden, Germany | |
| b102 | SLUB Dresden | |
| https://ror.org/05nqsnd28 | Deutsches Archäologisches Institut, Abteilung Athen | |
| https://ror.org/04zc7p361 | University of Kassel | |
| https://ror.org/04tjfqn96 | Leibniz Institute for the History and Culture of Eastern Europe (GWZO) | |
| https://ror.org/041qv0h25 | Deutsches Archäologisches Institut, Zentrale | |
| https://ror.org/041nas322 | University of Bonn | |
| https://ror.org/0387jng26 | Max Planck Institute for Human Cognitive and Brain Sciences | |
| https://ror.org/01nrxwf90 | University of Edinburgh | |
| b103 | SaxFDM | |
| b104 | Julius Kühn-Institut – Federal Research Centre for Cultivated Plants | |
| b105 | Plant Sciences, Institute of Bio- und Geosciences, Forschungszentrum Jülich, Germany | |
| b106 | Institute for Biological Data Science, Heinrich Heine University Düsseldorf, Germany | |
| b107 | Servicecenter eSciences | |
| b108 | Data Center for the Humanities (DCH) | |
| b109 | Gesellschaft fuer Biologische Daten e.V. GFBio | |
| b110 | The University of Manchester | |
| b111 | Department of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany | |
| b112 | scalable minds GmbH | |
| b113 | Biodata Mining Group, Faculty of Technology, University of Bielefeld, Germany | |
| b114 | Max-Delbrück-Centrum für Molekulare Medizin in der Helmholtz-Gemeinschaft | |
| b115 | BioCampus Montpellier | |
| b116 | Centre for Digital Scholarship Leiden University Libraries, The Netherlands | |
| b117 | Institute for Molecular and Clinical Immunology and Service Unit Multiparametric Bioimaging and Cytometry, University of Magdeburg, Germany | |
| b118 | Hopp-Children’s Cancer Center Heidelberg (KiTZ), Heidelberg, Germany. Division of Pediatric Neuro-oncology, German Cancer Consortium (DKTK), German Cancer Research Center (DKFZ), Heidelberg, Germany | |
| b119 | CNRS Délégation Ile-de-France Sud | |
| b120 | Bundesanstalt für Materialforschung und -prüfung | |
| b121 | Center for Molecular Medicine Cologne, University of Cologne | |
| b122 | EKFZ TU Dresden | |
| b123 | Hannes | |
| b124 | Carl Zeiss Microscopy GmbH | |
| b125 | Institute of Neurology (Edinger Institute), University Hospital, Goethe University, Frankfurt, Germany | |
| b126 | Institute of Materials, Technologies and Mechanics, University of Magdeburg, Germany | |
| b127 | The Carpentries: @carpentries | |
| b128 | Max Planck Institute | |
| b129 | KNIME | |
| b130 | Friedrich Miescher Institute for Biomedical Research (FMI) | |
| b131 | University Goettingen | |
| b132 | @fmi-basel | |
| b133 | BioVisionCenter, University of Zurich | |
| https://ror.org/00f5q5839 | HAWK University of Applied Sciences and Arts |
ok, so now we’ll setup a query to update all labels to be the english and german names.
Run this on the fuseki update interface
<<prefixes>>
delete {
graph ?g {
ror:0534re684 rdfs:label ?label .
}
}
insert {
graph ?g {
ror:0534re684 rdfs:label "Max-Planck-Institut für Evolutionsbiologie"@de, "Max Planck Institute for Evolutionary Biology"@en .
}
}
where {
graph ?g {
ror:0534re684 rdfs:label ?label .
}
}
| HTTP/1.1 400 Bad Request | ||
|---|---|---|
| Server: nginx/1.22.1 | ||
| Date: Wed | 01 Jul 2026 15:02:17 GMT | |
| Content-Type: text/plain;charset=utf-8 | ||
| Content-Length: 38 | ||
| Connection: keep-alive | ||
| Vary: Origin | ||
| Fuseki-Request-Id: 971 | ||
| Cache-Control: must-revalidate | no-cache | no-store |
| Pragma: no-cache | ||
| SPARQL Update: No ‘update=’ parameter |
<<prefixes>>
select * where {
ror:0534re684 rdfs:label ?label .
}| label |
|---|
| Max Planck Institute for Evolutionary Biology |
| Max-Planck-Institut für Evolutionsbiologie |