Allocation refactors

This release contains updates to the allocation scheme. Allocation is currently limited to carbon only. Efforts in this release intended to lay ground-work to more easily enable other species (eg nutrients and isotopes). A new variable has been added to the restart code, and thus will not be compatible with older finidat files. No changes were made to the HLM interface. Branchfall was turned on, but is not utilizing the parameter file, as the default was not prepared yet.