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  • wega Informatik AG
  • Basel, Switzerland
  • 10:36 (UTC +02:00)
  • LinkedIn in/niklas-mertsch

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NMertsch/README.md

About me

  • Job: Software Developer, Data Engineer, Lab Digitalization/Automation Consultant
  • Field: Data-related projects for life science labs (mostly data engineering, rarely data science)
  • Languages: Mainly Python, also Java, C#, SQL, Bash, and whatever is needed to get the job done
  • Location: From Germany, living in Switzerland
  • LinkedIn: in/niklas-mertsch
  • Languages: German, English

Public projects

SiLA2-related:

  • Author: sila_python: Python implementation of the SiLA2 standard (Python, gRPC)
  • Author: sila_interoperability: Interoperability test framework for SiLA2 implementations (Python, gRPC)
  • Author: sila_base/xslt: XML-to-Protobuf converter written in XSLT 1.0 for cross-language compatibility (XSLT, Protobuf)
  • Author: sila2-proto-generator-web: Static website for converting SiLA2 feature defnitions (XML) to Protobuf (HTML, Vanilla JS)
  • Contributor: SiLA2 specification for laboratory automation (gRPC)
  • Contributor: sila_java: Java implementation of the SiLA2 standard (Java, gRPC)

Recent:

  • fastq-stats: Count reads and basepairs in .fastq.gz files (Rust, Python)

Stale:

  • podcaster: Command-line podcast player (Python)
  • SDF: Convert microscopy file formats to unified XML (Python, student job)
  • dotfiles: Collection of configuration, scripts and notes for my Linux setup (Linux, Bash)

Open Source Contributions

Most of my daily work is not public. However, when I find an issue with a FOSS project I'm using, I create a ticket and (if feasible) try to make a PR. Here is a selection:

Communities

Popular repositories Loading

  1. podcaster podcaster Public

    Command Line Podcast Player

    Python 3

  2. dotfiles dotfiles Public

    My ubuntu/i3 configuration

    Shell

  3. dotfiles-hyprland-nixos dotfiles-hyprland-nixos Public

    Barebones collection of NixOS/Hyprland configuration

    Nix

  4. NMertsch NMertsch Public

    My profile README

  5. maturin maturin Public

    Forked from PyO3/maturin

    Build and publish crates with pyo3, cffi and uniffi bindings as well as rust binaries as python packages

    Rust