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Debug gdas.x NaN abort: update sorc/fv3-jedi to Gaussian-grid read path (RussTreadon-NOAA fork @81a8e1c) #2098

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Debug gdas.x NaN abort: update sorc/fv3-jedi to Gaussian-grid read path (RussTreadon-NOAA fork @81a8e1c) #2098

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Initial plan
Copilot Mar 20, 2026
259dd1f
Update sorc/fv3-jedi: RussTreadon-NOAA fork @81a8e1c with Gaussian re…
Copilot Mar 20, 2026
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10 changes: 8 additions & 2 deletions .gitmodules
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Original file line number Diff line number Diff line change
Expand Up @@ -35,8 +35,14 @@
branch = develop
[submodule "sorc/fv3-jedi"]
path = sorc/fv3-jedi
url = https://github.com/jcsda/fv3-jedi.git
branch = develop
# Temporarily forked to RussTreadon-NOAA to pick up the Gaussian-grid read path
# (IOStructuredGrid read/write) and MPI GlobalInterpolator desync fixes.
# TODO: once the NaN guard fix (std::isnan in readVarToStructuredAtlasField) and
# all Gaussian-grid IO changes are merged into jcsda/fv3-jedi develop, restore:
# url = https://github.com/jcsda/fv3-jedi.git
# branch = develop
url = https://github.com/RussTreadon-NOAA/fv3-jedi.git
branch = copilot/debug-segmentation-fault-issue
[submodule "sorc/soca"]
path = sorc/soca
url = https://github.com/NOAA-EMC/soca.git
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2 changes: 1 addition & 1 deletion sorc/fv3-jedi
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Submodule fv3-jedi updated 5 files
+0 −28 .github/ISSUE_TEMPLATE/bug-report.md
+0 −8 .github/ISSUE_TEMPLATE/config.yaml
+0 −26 .github/ISSUE_TEMPLATE/general-issue.md
+937 −21 src/fv3jedi/IO/StructuredGrid/IOStructuredGrid.cc
+48 −3 src/fv3jedi/IO/StructuredGrid/IOStructuredGrid.h