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Merged
merged 3 commits into from
Apr 16, 2025
Merged

Adding OM5 Baltic test cases #524

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8a09182
Adding OM5 Baltic test cases
Apr 11, 2025
6bd65c8
Adding links to .datasets in INPUT folder for OM5 Baltic experiments
Apr 16, 2025
3258cc6
Fix SIS_layout issues in OM5 Baltic cases
Apr 16, 2025
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1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/.datasets
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../../../.datasets
2 changes: 2 additions & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/.gitignore
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# Undo *.nc in top-level .gitignore
!*.nc
9 changes: 9 additions & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/MOM_channels_global_025
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! This file specifies restricted channel widths in MOM. The order is:
! [U|V]_width, min_longitude, max_longitude, min_latitude, max_latitude, width

U_width, -5.9, -5.4, 35.8, 36.2, 12000.0 ! Gibraltar
U_width, 26.4, 26.8, 40.4, 40.6, 5000.0 ! Dardanelles

V_width, 28.8, 29.4, 41.1, 41.2, 2500.0 ! Bosporus - should be 1km wide.
V_width, 43.25, 43.5, 12.6, 12.8, 10000.0 ! Red Sea, Bab-el-Mendeb
V_width, 141.5, 141.7, 52.0, 52.15, 2500.0 ! Between Sakhalin & Russia
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/WOA05_pottemp_salt.nc
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.datasets/obs/WOA05_pottemp_salt.nc
26 changes: 26 additions & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/analysis_vgrid_lev35.v1.cdl
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netcdf analysis_vgrid_lev35.v1 {
dimensions:
zt = 35 ;
zw = 36 ;
variables:
double zw(zw) ;
zw:comment = "Used for diagnostics only, based on WOA09 standard levels" ;
zw:long_name = "Diagnostic depth coordinate interface position" ;
zw:units = "m" ;
double zt(zt) ;
zt:comment = "Used for diagnostics only, based on WOA09 standard levels" ;
zt:long_name = "Diagnostic depth coordinate level position" ;
zt:units = "m" ;

// global attributes:
:filename = "analysis_vgrid_lev35.v1.nc" ;
data:

zw = 0, 5, 15, 25, 40, 62.5, 87.5, 112.5, 137.5, 175, 225, 275, 350, 450,
550, 650, 750, 850, 950, 1050, 1150, 1250, 1350, 1450, 1625, 1875, 2250,
2750, 3250, 3750, 4250, 4750, 5250, 5750, 6250, 6750 ;

zt = 2.5, 10, 20, 30, 50, 75, 100, 125, 150, 200, 250, 300, 400, 500, 600,
700, 800, 900, 1000, 1100, 1200, 1300, 1400, 1500, 1750, 2000, 2500,
3000, 3500, 4000, 4500, 5000, 5500, 6000, 6500 ;
}
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1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/atmos_mosaic_tile1Xland_mosaic_tile1.nc
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.datasets/Baltic_OM4_025/atmos_mosaic_tile1Xland_mosaic_tile1.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/atmos_mosaic_tile1Xocean_mosaic_tile1.nc
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.datasets/Baltic_OM4_025/atmos_mosaic_tile1Xocean_mosaic_tile1.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/diag_rho2.nc
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../../OM4_025/INPUT/diag_rho2.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/geothermal_davies2013_v1.nc
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.datasets/Baltic_OM4_025/geothermal_davies2013_v1.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/grid_spec.nc
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.datasets/Baltic_OM4_025/grid_spec.nc
35 changes: 35 additions & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/hycom1_75_800m.cdl
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netcdf hycom1_75_800m {
dimensions:
layers = 75 ;
interfaces = 76 ;
variables:
double dz(layers) ;
dz:long_name = "z* coordinate level thickness" ;
dz:units = "m" ;
double sigma2(interfaces) ;
sigma2:long_name = "Interface target potential density referenced to 2000 dbars" ;
sigma2:units = "kg/m3" ;
data:

dz = 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2.01, 2.01,
2.01, 2.02, 2.03, 2.05, 2.07, 2.09, 2.13, 2.18, 2.24, 2.32, 2.42, 2.56,
2.73, 2.95, 3.23, 3.57, 3.99, 4.52, 5.16, 5.95, 6.91, 8.06, 9.46, 11.13,
13.13, 15.5, 18.32, 21.65, 25.56, 30.16, 35.54, 41.81, 49.1, 57.56,
67.34, 78.63, 91.61, 106.51, 123.58, 143.08, 165.32, 190.61, 219.33,
251.88, 288.68, 330.23, 377.05, 429.71, 488.84, 555.13, 629.33, 712.25,
804.76 ;

sigma2 = 1010, 1014.3034, 1017.8088, 1020.843, 1023.5566, 1025.813,
1027.0275, 1027.9114, 1028.6422, 1029.2795, 1029.852, 1030.3762,
1030.8626, 1031.3183, 1031.7486, 1032.1572, 1032.5471, 1032.9207,
1033.2798, 1033.6261, 1033.9608, 1034.2519, 1034.4817, 1034.6774,
1034.8508, 1035.0082, 1035.1533, 1035.2886, 1035.4159, 1035.5364,
1035.6511, 1035.7608, 1035.8661, 1035.9675, 1036.0645, 1036.1554,
1036.2411, 1036.3223, 1036.3998, 1036.4739, 1036.5451, 1036.6137,
1036.68, 1036.7441, 1036.8062, 1036.8526, 1036.8874, 1036.9164,
1036.9418, 1036.9647, 1036.9857, 1037.0052, 1037.0236, 1037.0409,
1037.0574, 1037.0738, 1037.0902, 1037.1066, 1037.123, 1037.1394,
1037.1558, 1037.1722, 1037.1887, 1037.206, 1037.2241, 1037.2435,
1037.2642, 1037.2866, 1037.3112, 1037.3389, 1037.3713, 1037.4118,
1037.475, 1037.6332, 1037.8104, 1038 ;
}
Binary file added ice_ocean_SIS2/Baltic_OM5_025/INPUT/hycom1_75_800m.nc
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1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/land_mask.nc
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.datasets/Baltic_OM4_025/land_mask.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/land_mosaic_tile1Xocean_mosaic_tile1.nc
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.datasets/Baltic_OM4_025/land_mosaic_tile1Xocean_mosaic_tile1.nc
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1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/ncar_precip.clim.nc
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.datasets/CORE/NYF_v2.0/ncar_precip.clim.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/ncar_rad.clim.nc
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.datasets/CORE/NYF_v2.0/ncar_rad.clim.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/ocean_hgrid.nc
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.datasets/Baltic_OM4_025/ocean_hgrid.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/ocean_mask.nc
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.datasets/Baltic_OM4_025/ocean_mask.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/ocean_mosaic.nc
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.datasets/Baltic_OM4_025/ocean_mosaic.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/ocean_topog.nc
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.datasets/Baltic_OM4_025/ocean_topog.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/q_10_mod.clim.nc
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.datasets/CORE/NYF_v2.0/q_10_mod.clim.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/runoff.daitren.clim.v2011.02.10a.1440x1080.nc
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.datasets/Baltic_OM4_025/runoff.daitren.clim.v2011.02.10a.1440x1080.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/salt_restore.v20140616.nc
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.datasets/Baltic_OM4_025/salt_restore.v20140616.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/seawifs_1998-2006_smoothed_2X.v20140616.nc
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.datasets/Baltic_OM4_025/seawifs_1998-2006_smoothed_2X.v20140616.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/slp.clim.nc
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.datasets/CORE/NYF_v2.0/slp.clim.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/t_10_mod.clim.nc
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.datasets/CORE/NYF_v2.0/t_10_mod.clim.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/tidal_amplitude.v20140616.nc
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.datasets/Baltic_OM4_025/tidal_amplitude.v20140616.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/topog.nc
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ocean_topog.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/u_10_mod.clim.nc
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.datasets/CORE/NYF_v2.0/u_10_mod.clim.nc
1 change: 1 addition & 0 deletions ice_ocean_SIS2/Baltic_OM5_025/INPUT/v_10_mod.clim.nc
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.datasets/CORE/NYF_v2.0/v_10_mod.clim.nc
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