This marks the first release from BioNeMo Recipes, a lighter-weight version of the BioNeMo model training framework which demonstrates NVIDIA-optimized reference architectures for biological foundation models. This release drops support for the monolithic bionemo-framework container, and instead opts for per-folder Dockerfiles demonstrating how to extend the NGC PyTorch container with the necessary packages for biological foundation model training. BioNeMo Recipes is continuously tested with nightly CI and all further releases of BioNeMo Recipes will occur on a rolling basis — the v3.0.0 tag simply marks a reference point.
The recipes are hermetic and simple by design. The best way to use these recipes is as reference files to your coding agent — tell your agent to run them, or use them as reference for new models to build yourself.
Legacy bionemo-framework code can be found in the bionemo2 branch.