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NVIDIA / bionemo-framework Public

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Add a generic ViT model to BioNeMo Recipes.#1103

Merged

cspades merged 13 commits intomainNVIDIA/bionemo-framework:mainfrom

cye/vit-recipeNVIDIA/bionemo-framework:cye/vit-recipeCopy head branch name to clipboard

Sep 17, 2025

Conversation Commits13 (13)Checks Files changed

Merged

Add a generic ViT model to BioNeMo Recipes.#1103
cspades merged 13 commits intomainfrom
cye/vit-recipe

Commits

Commits on Sep 16, 2025

Add TIMM ViT recipe to BioNeMo with Megatron-FSDP.
cspades
committed
Use megatron-fsdp==0.1.0rc1 which has the >2D parameter fix.
cspades
committed
Lint.
cspades
committed
Add num_classes suggestion by CodeRabbit. Good rabbit.
cspades
committed
Compress the dataset, and add dataset un-tar support to train.py.
cspades
committed
Refactor, docstring updates, LICENSE-ing / attribution to Ross, etc.
cspades
committed
Pin TP to 1, remove from config.
cspades
committed
Refactor everything, add checkpointing utilities, and add inference scripts and tests using Torch.save checkpoint loading.
cspades
committed
Minor function and config changes.
cspades
committed
Fix TE sharding, README.md updates to add inference instructions.
cspades
committed
Migrate to Beans dataset (MIT License).
cspades
committed
Increase recipe unit testing Docker container shared memory.
cspades
committed
Add ViT and Beans licensing to BioNeMo.
cspades
committed

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