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@OHDSI

Observational Health Data Sciences and Informatics

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  1. CommonDataModel CommonDataModel Public

    Definition and DDLs for the OMOP Common Data Model (CDM)

    HTML 917 458

  2. Vocabulary-v5.0 Vocabulary-v5.0 Public

    Build process for the OHDSI Standardized Vocabularies. Currently not available as independent release.

    PLpgSQL 232 74

  3. Atlas Atlas Public

    ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

    JavaScript 277 141

  4. Cyclops Cyclops Public

    Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

    C++ 39 32

  5. CohortMethod CohortMethod Public

    An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

    R 82 60

  6. PatientLevelPrediction PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    R 189 90

Repositories

Showing 10 of 321 repositories
  • CohortAlgebra Public

    Cohort Algebra to create new cohort(s) from existing cohorts. This is NOT part of HADES. CohortGenerator is expected to replace CohortAlgebra

    OHDSI/CohortAlgebra’s past year of commit activity
    R 1 0 1 1 Updated Feb 23, 2025
  • CommunityDashboard Public

    Dashboard to monitor the health of the OHDSI community. A Flask app of Dash Dashboards for tracking public API's

    OHDSI/CommunityDashboard’s past year of commit activity
    TypeScript 6 Apache-2.0 1 11 0 Updated Feb 23, 2025
  • CohortConstructor Public
    OHDSI/CohortConstructor’s past year of commit activity
    R 2 Apache-2.0 0 44 4 Updated Feb 22, 2025
  • TheBookOfOhdsiInJapanese Public

    A translation of https://github.com/OHDSI/TheBookOfOhdsi into Japanese

    OHDSI/TheBookOfOhdsiInJapanese’s past year of commit activity
    R 1 CC0-1.0 3 0 1 Updated Feb 22, 2025
  • Ares Public

    A Research Exploration System

    OHDSI/Ares’s past year of commit activity
    Vue 12 Apache-2.0 7 40 2 Updated Feb 21, 2025
  • ETL-Synthea Public

    A package supporting the conversion from Synthea CSV to OMOP CDM

    OHDSI/ETL-Synthea’s past year of commit activity
    R 102 74 2 0 Updated Feb 21, 2025
  • ShinyProxyDeploy Public

    Deploy OHDSI Shiny apps to results.ohdsi.org

    OHDSI/ShinyProxyDeploy’s past year of commit activity
    0 3 0 0 Updated Feb 21, 2025
  • PhenotypePhebruary2025 Public
    OHDSI/PhenotypePhebruary2025’s past year of commit activity
    Dockerfile 0 0 0 0 Updated Feb 21, 2025
  • OhdsiReportGenerator Public

    Code to extract data from the OHDSI results structure and generate plots, presentations and reports

    OHDSI/OhdsiReportGenerator’s past year of commit activity
    R 0 0 0 0 Updated Feb 21, 2025
  • PatientLevelPrediction Public

    An R package for performing patient level prediction in an observational database in the OMOP Common Data Model.

    OHDSI/PatientLevelPrediction’s past year of commit activity
    R 189 90 26 (1 issue needs help) 3 Updated Feb 21, 2025
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