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feat(protocol-designer): add submerge for aspirate and dispense #17368

Merged
merged 16 commits into from
Feb 3, 2025
Original file line number Diff line number Diff line change
Expand Up @@ -149,6 +149,8 @@
"aspirate_mix_times": "2",
"aspirate_mix_volume": "30",
"aspirate_mmFromBottom": 1,
"aspirate_submerge_delay_seconds": null,
"aspirate_submerge_speed": null,
"aspirate_touchTip_checkbox": true,
"aspirate_touchTip_mmFromTop": -2,
"aspirate_wellOrder_first": "t2b",
Expand All @@ -173,6 +175,8 @@
"dispense_mix_times": null,
"dispense_mix_volume": null,
"dispense_mmFromBottom": 0.5,
"dispense_submerge_delay_seconds": null,
"dispense_submerge_speed": null,
"dispense_touchTip_checkbox": true,
"dispense_touchTip_mmFromTop": null,
"dispense_wellOrder_first": "t2b",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -181,6 +181,8 @@
"aspirate_mix_times": null,
"aspirate_mix_volume": null,
"aspirate_mmFromBottom": 1,
"aspirate_submerge_delay_seconds": null,
"aspirate_submerge_speed": null,
"aspirate_touchTip_checkbox": false,
"aspirate_touchTip_mmFromTop": null,
"aspirate_wellOrder_first": "t2b",
Expand All @@ -205,6 +207,8 @@
"dispense_mix_times": null,
"dispense_mix_volume": null,
"dispense_mmFromBottom": 0.5,
"dispense_submerge_delay_seconds": null,
"dispense_submerge_speed": null,
"dispense_touchTip_checkbox": false,
"dispense_touchTip_mmFromTop": null,
"dispense_wellOrder_first": "t2b",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -199,6 +199,8 @@
"aspirate_mix_times": null,
"aspirate_mix_volume": null,
"aspirate_mmFromBottom": null,
"aspirate_submerge_delay_seconds": null,
"aspirate_submerge_speed": null,
"aspirate_touchTip_checkbox": false,
"aspirate_touchTip_mmFromTop": null,
"aspirate_wellOrder_first": "t2b",
Expand All @@ -223,6 +225,8 @@
"dispense_mix_times": null,
"dispense_mix_volume": null,
"dispense_mmFromBottom": null,
"dispense_submerge_delay_seconds": null,
"dispense_submerge_speed": null,
"dispense_touchTip_checkbox": false,
"dispense_touchTip_mmFromTop": null,
"dispense_wellOrder_first": "t2b",
Expand Down
4 changes: 4 additions & 0 deletions protocol-designer/fixtures/protocol/8/doItAllV8.json
Original file line number Diff line number Diff line change
Expand Up @@ -159,6 +159,8 @@
"aspirate_mix_times": null,
"aspirate_mix_volume": null,
"aspirate_mmFromBottom": null,
"aspirate_submerge_delay_seconds": null,
"aspirate_submerge_speed": null,
"aspirate_touchTip_checkbox": false,
"aspirate_touchTip_mmFromTop": null,
"aspirate_wellOrder_first": "t2b",
Expand All @@ -183,6 +185,8 @@
"dispense_mix_times": null,
"dispense_mix_volume": null,
"dispense_mmFromBottom": null,
"dispense_submerge_delay_seconds": null,
"dispense_submerge_speed": null,
"dispense_touchTip_checkbox": false,
"dispense_touchTip_mmFromTop": null,
"dispense_wellOrder_first": "t2b",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -119,6 +119,8 @@
"aspirate_mix_times": 3,
"aspirate_mix_volume": "2",
"aspirate_mmFromBottom": 1,
"aspirate_submerge_delay_seconds": null,
"aspirate_submerge_speed": null,
"aspirate_touchTip_checkbox": true,
"aspirate_touchTip_mmFromTop": -12.8,
"aspirate_wellOrder_first": "t2b",
Expand All @@ -143,6 +145,8 @@
"dispense_mix_times": 2,
"dispense_mix_volume": "3",
"dispense_mmFromBottom": 2.5,
"dispense_submerge_delay_seconds": null,
"dispense_submerge_speed": null,
"dispense_touchTip_checkbox": true,
"dispense_touchTip_mmFromTop": null,
"dispense_wellOrder_first": "b2t",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -63,6 +63,8 @@
"aspirate_mix_times": null,
"aspirate_mix_volume": null,
"aspirate_mmFromBottom": 29,
"aspirate_submerge_delay_seconds": null,
"aspirate_submerge_speed": null,
"aspirate_touchTip_checkbox": false,
"aspirate_touchTip_mmFromTop": null,
"aspirate_wellOrder_first": "t2b",
Expand All @@ -87,6 +89,8 @@
"dispense_mix_times": null,
"dispense_mix_volume": null,
"dispense_mmFromBottom": null,
"dispense_submerge_delay_seconds": null,
"dispense_submerge_speed": null,
"dispense_touchTip_checkbox": false,
"dispense_touchTip_mmFromTop": null,
"dispense_wellOrder_first": "t2b",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -62,6 +62,8 @@
"aspirate_mix_times": null,
"aspirate_mix_volume": null,
"aspirate_mmFromBottom": null,
"aspirate_submerge_delay_seconds": null,
"aspirate_submerge_speed": null,
"aspirate_touchTip_checkbox": false,
"aspirate_touchTip_mmFromTop": null,
"aspirate_wellOrder_first": "t2b",
Expand All @@ -86,6 +88,8 @@
"dispense_mix_times": null,
"dispense_mix_volume": null,
"dispense_mmFromBottom": null,
"dispense_submerge_delay_seconds": null,
"dispense_submerge_speed": null,
"dispense_touchTip_checkbox": false,
"dispense_touchTip_mmFromTop": null,
"dispense_wellOrder_first": "t2b",
Expand Down Expand Up @@ -120,6 +124,8 @@
"aspirate_mix_times": null,
"aspirate_mix_volume": null,
"aspirate_mmFromBottom": null,
"aspirate_submerge_delay_seconds": null,
"aspirate_submerge_speed": null,
"aspirate_touchTip_checkbox": false,
"aspirate_touchTip_mmFromTop": null,
"aspirate_wellOrder_first": "t2b",
Expand All @@ -144,6 +150,8 @@
"dispense_mix_times": null,
"dispense_mix_volume": null,
"dispense_mmFromBottom": null,
"dispense_submerge_delay_seconds": null,
"dispense_submerge_speed": null,
"dispense_touchTip_checkbox": false,
"dispense_touchTip_mmFromTop": null,
"dispense_wellOrder_first": "t2b",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -58,6 +58,7 @@
"microliter": "µL",
"microliterPerSec": "µL/s",
"millimeter": "mm",
"millimeterPerSec": "mm/s",
"nanometer": "nm",
"minutes": "m",
"rpm": "rpm",
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -107,6 +107,8 @@
"speed": "Speed",
"starting_deck": "Starting deck",
"step_substeps": "{{stepType}} details",
"submerge": "Submerge",
"submerge_speed": "Submerge speed",
"temperature": "Temperature",
"temperature_module": {
"active": "<semiBoldText>{{module}}</semiBoldText><text>set to</text><tag/>",
Expand Down
2 changes: 2 additions & 0 deletions protocol-designer/src/assets/localization/en/tooltip.json
Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,7 @@
"aspirate_mmFromBottom": "Adjust tip position for aspirate",
"aspirate_touchTip_checkbox": "Touch tip to each side of the well after aspirating",
"aspirate_touchTip_mmFromTop": "Distance from the top of the well",
"aspirate_submerge": "Lower the tip into the liquid before aspirating",
"aspirate_wells": "First select a source labware",
"blowout_checkbox": "Blow extra air through the tip",
"blowout_flowRate": "Blowout speed",
Expand All @@ -50,6 +51,7 @@
"dispense_labware": "Pipette unable to access labware in staging area",
"dispense_mix_checkbox": "Aspirate and dispense repeatedly after main dispense",
"dispense_mmFromBottom": "Adjust tip position for dispense",
"dispense_submerge": "Lower the tip into the liquid before dispensing",
"dispense_touchTip_checkbox": "Touch tip to each side of the well after dispensing",
"dispense_touchTip_mmFromTop": "Distance from the top of the well",
"dispense_wells": "First select a destination labware",
Expand Down
8 changes: 8 additions & 0 deletions protocol-designer/src/form-types.ts
Original file line number Diff line number Diff line change
Expand Up @@ -32,6 +32,8 @@ export type StepFieldName = string
// | 'aspirate_mix_times'
// | 'aspirate_mix_volume'
// | 'aspirate_mmFromBottom'
// | 'aspirate_submerge_delay_seconds'
// | 'aspirate_submerge_speed'
// | 'aspirate_touchTip_checkbox'
// | 'aspirate_touchTip_mmFromTop'
// | 'aspirate_wellOrder_first'
Expand All @@ -51,6 +53,8 @@ export type StepFieldName = string
// | 'dispense_mix_times'
// | 'dispense_mix_volume'
// | 'dispense_mmFromBottom'
// | 'dispense_submerge_delay_seconds'
// | 'dispense_submerge_speed'
// | 'dispense_touchTip_checkbox'
// | 'dispense_touchTip_mmFromTop'
// | 'dispense_wellOrder_first'
Expand Down Expand Up @@ -252,6 +256,8 @@ export interface HydratedMoveLiquidFormData extends AnnotationFields {
aspirate_mix_times?: number | null
aspirate_mix_volume?: number | null
aspirate_mmFromBottom?: number | null
aspirate_submerge_delay_seconds?: number | null
aspirate_submerge_speed?: number | null
aspirate_touchTip_mmFromTop?: number | null
aspirate_wells_grouped?: boolean | null
aspirate_x_position?: number | null
Expand All @@ -266,6 +272,8 @@ export interface HydratedMoveLiquidFormData extends AnnotationFields {
dispense_mix_times?: number | null
dispense_mix_volume?: number | null
dispense_mmFromBottom?: number | null
dispense_submerge_delay_seconds?: number | null
dispense_submerge_speed?: number | null
dispense_touchTip_mmFromTop?: number | null
dispense_x_position?: number | null
dispense_y_position?: number | null
Expand Down
4 changes: 4 additions & 0 deletions protocol-designer/src/load-file/migration/8_5_0.ts
Original file line number Diff line number Diff line change
Expand Up @@ -110,6 +110,10 @@ export const migrateFile = (
matchingDispenseLabwareWellDepth,
1
),
aspirate_submerge_delay_seconds: null,
dispense_submerge_delay_seconds: null,
aspirate_submerge_speed: null,
dispense_submerge_speed: null,
},
}
}
Expand Down
Original file line number Diff line number Diff line change
@@ -1,15 +1,24 @@
import { useSelector } from 'react-redux'
import { useTranslation } from 'react-i18next'
import {
ALIGN_CENTER,
COLORS,
DIRECTION_COLUMN,
Divider,
Flex,
Icon,
ListItem,
SPACING,
StyledText,
Tabs,
Tooltip,
useHoverTooltip,
} from '@opentrons/components'
import { getTrashOrLabware } from '@opentrons/step-generation'
import { getEnableReturnTip } from '../../../../../../feature-flags/selectors'
import {
getEnableLiquidClasses,
getEnableReturnTip,
} from '../../../../../../feature-flags/selectors'
import {
getAdditionalEquipmentEntities,
getLabwareEntities,
Expand Down Expand Up @@ -61,11 +70,13 @@ export function MoveLiquidTools(props: StepFormProps): JSX.Element {
tab,
setTab,
} = props
const [targetProps, tooltipProps] = useHoverTooltip()
const { t, i18n } = useTranslation(['protocol_steps', 'form', 'tooltip'])
const { path } = formData
const additionalEquipmentEntities = useSelector(
getAdditionalEquipmentEntities
)
const enableLiquidClasses = useSelector(getEnableLiquidClasses)
const enableReturnTip = useSelector(getEnableReturnTip)
const labwares = useSelector(getLabwareEntities)
const pipettes = useSelector(getPipetteEntities)
Expand Down Expand Up @@ -316,6 +327,67 @@ export function MoveLiquidTools(props: StepFormProps): JSX.Element {
]
}
/>
{enableLiquidClasses ? (
<>
<Divider marginY="0" />
<Flex
flexDirection={DIRECTION_COLUMN}
gridGap={SPACING.spacing8}
padding={`0 ${SPACING.spacing16}`}
>
<Flex gridGap={SPACING.spacing8} alignItems={ALIGN_CENTER}>
<StyledText
desktopStyle="bodyDefaultRegular"
color={COLORS.grey60}
>
{t('protocol_steps:submerge')}
</StyledText>
<Flex {...targetProps}>
<Icon
name="information"
size="1rem"
color={COLORS.grey60}
data-testid="information_icon"
/>
</Flex>
<Tooltip tooltipProps={tooltipProps}>
{t(`tooltip:step_fields.defaults.${tab}_submerge`)}
</Tooltip>
</Flex>
<ListItem type="noActive">
<Flex
padding={SPACING.spacing12}
width="100%"
flexDirection={DIRECTION_COLUMN}
gridGap={SPACING.spacing8}
>
<InputStepFormField
showTooltip={false}
padding="0"
title={t('protocol_steps:submerge_speed')}
{...propsForFields[`${tab}_submerge_speed`]}
units={t('application:units.millimeterPerSec')}
errorToShow={getFormLevelError(
`${tab}_submerge_speed`,
mappedErrorsToField
)}
/>
<InputStepFormField
showTooltip={false}
padding="0"
title={t('protocol_steps:delay_duration')}
{...propsForFields[`${tab}_submerge_delay_seconds`]}
units={t('application:units.seconds')}
errorToShow={getFormLevelError(
`${tab}_submerge_delay_seconds`,
mappedErrorsToField
)}
/>
</Flex>
</ListItem>
</Flex>
</>
) : null}
<Divider marginY="0" />
<Flex
flexDirection={DIRECTION_COLUMN}
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -160,6 +160,8 @@ describe('createPresavedStepForm', () => {
aspirate_mix_times: null,
aspirate_mix_volume: null,
aspirate_mmFromBottom: null,
aspirate_submerge_delay_seconds: null,
aspirate_submerge_speed: null,
aspirate_touchTip_checkbox: false,
aspirate_touchTip_mmFromTop: null,
aspirate_wellOrder_first: 't2b',
Expand All @@ -177,6 +179,8 @@ describe('createPresavedStepForm', () => {
dispense_mix_times: null,
dispense_mix_volume: null,
dispense_mmFromBottom: null,
dispense_submerge_delay_seconds: null,
dispense_submerge_speed: null,
dispense_touchTip_checkbox: false,
dispense_touchTip_mmFromTop: null,
dispense_wellOrder_first: 't2b',
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -61,6 +61,8 @@ export function getDefaultsForStepType(
aspirate_mix_times: null,
aspirate_mix_volume: null,
aspirate_mmFromBottom: null,
aspirate_submerge_delay_seconds: null,
aspirate_submerge_speed: null,
aspirate_touchTip_checkbox: false,
aspirate_touchTip_mmFromTop: null,
aspirate_wellOrder_first: DEFAULT_WELL_ORDER_FIRST_OPTION,
Expand All @@ -85,6 +87,8 @@ export function getDefaultsForStepType(
dispense_mix_times: null,
dispense_mix_volume: null,
dispense_mmFromBottom: null,
dispense_submerge_delay_seconds: null,
dispense_submerge_speed: null,
dispense_touchTip_checkbox: false,
dispense_touchTip_mmFromTop: null,
dispense_wellOrder_first: DEFAULT_WELL_ORDER_FIRST_OPTION,
Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -34,6 +34,8 @@ describe('getDefaultsForStepType', () => {
aspirate_mix_times: null,
aspirate_mix_volume: null,
aspirate_mmFromBottom: null,
aspirate_submerge_delay_seconds: null,
aspirate_submerge_speed: null,
aspirate_touchTip_checkbox: false,
aspirate_touchTip_mmFromTop: null,

Expand All @@ -46,6 +48,8 @@ describe('getDefaultsForStepType', () => {
dispense_mix_times: null,
dispense_mix_volume: null,
dispense_mmFromBottom: null,
dispense_submerge_delay_seconds: null,
dispense_submerge_speed: null,
dispense_touchTip_checkbox: false,
dispense_touchTip_mmFromTop: null,

Expand Down
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