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Fix SyntaxError for nested quotes #1

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b4fa2c5
Update readme.md
jbelyeu Sep 26, 2025
651a7bc
Fix SyntaxError for nested quotes
mate-ldw Nov 7, 2025
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2 changes: 1 addition & 1 deletion paraviewer/process_paraphase.py
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Original file line number Diff line number Diff line change
Expand Up @@ -145,7 +145,7 @@ def make_trio_table_entries(
)
image_path = path.join(
IMAGES_PATH.format(sample=trio.IndividualID + "-trio"),
f"{trio.IndividualID + "-trio"}_{region}.png",
f"{trio.IndividualID + '-trio'}_{region}.png",
)

trio_entries.append(
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7 changes: 5 additions & 2 deletions readme.md
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Expand Up @@ -27,8 +27,11 @@ If an experiment is run with trios present and annotated via a pedigree file, th

### Demos
Want to try out the websites from Paraviewer? We've prepared two demo sites:
* [WGS Demo](https://pacificbiosciences.github.io/ParaviewerWGSDemo): 22 samples from the Platinum Pedigree cohort. 5 regions are included ([GBA](https://github.com/PacificBiosciences/paraphase/blob/main/docs/GBA.md), [NEB](https://github.com/PacificBiosciences/paraphase/blob/main/docs/NEB.md), [PMS2](https://github.com/PacificBiosciences/paraphase/blob/main/docs/PMS2.md), [RCCX](https://github.com/PacificBiosciences/paraphase/blob/main/docs/RCCX.md), [SMN1](https://github.com/PacificBiosciences/paraphase/blob/main/docs/SMN1_SMN2.md))
* [PureTarget Carrier Panel Demo](https://pacificbiosciences.github.io/ParaviewerPTCPDemo): 19 [PureTarget Carrier Panel](https://www.pacb.com/wp-content/uploads/Application-note-Consolidate-challenging-genes-with-PureTarget-carrier-screen-panel.pdf) samples from Coriell with variants in the CYP21 (part of RCCX) or SMN regions.
* [WGS Demo](https://pacificbiosciences.github.io/ParaviewerWGSDemo):
* 22 samples from the Platinum Pedigree cohort.
* 5 regions are included ([GBA](https://github.com/PacificBiosciences/paraphase/blob/main/docs/GBA.md), [NEB](https://github.com/PacificBiosciences/paraphase/blob/main/docs/NEB.md), [PMS2](https://github.com/PacificBiosciences/paraphase/blob/main/docs/PMS2.md), [RCCX](https://github.com/PacificBiosciences/paraphase/blob/main/docs/RCCX.md), [SMN1](https://github.com/PacificBiosciences/paraphase/blob/main/docs/SMN1_SMN2.md))
* [PureTarget Carrier Panel Demo](https://pacificbiosciences.github.io/ParaviewerPTCPDemo):
* 19 [PureTarget Carrier Panel](https://www.pacb.com/wp-content/uploads/Application-note-Consolidate-challenging-genes-with-PureTarget-carrier-screen-panel.pdf) samples from Coriell with variants in the CYP21 (part of RCCX) or SMN regions.

#### Firefox note:
Issues may be encountered in Firefox when loading these demo sites. We recommend the Chrome browser.
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