Rework visit scribe into a SOAP-note generator via PhenoML fhir2summary - #19
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goelalex wants to merge 2 commits into
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Rework visit scribe into a SOAP-note generator via PhenoML fhir2summary#19goelalex wants to merge 2 commits into
goelalex wants to merge 2 commits into
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Replace the GAD-7/PHQ-9 "Screening scribe" with a SOAP-note flow driven from the "Fill chart note" transcript. New scribe-soap-note bot runs the pipeline transcribe -> lang2fhir (createMulti) -> persist FHIR resources to the chart -> fhir2summary (narrative template, find-or-create + reused), returning a SOAP note the clinician reviews and saves as a DocumentReference (Documents tab + Timeline). New SoapNotePanel replaces ScribePanel; the screening bot, profile builder, screening util, and seed bundle are removed. Base URL is a required PHENOML_BASE_URL secret on the new bot (matching referral-intake). Co-Authored-By: Claude Opus 4.8 <noreply@anthropic.com>
Changing FHIR to Summary template to get clearer results that read better.
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Reworks the visit-scribe demo to showcase PhenoML's fhir2summary: the GAD-7/PHQ-9 "Screening scribe" is removed and a SOAP note is generated from the "Fill chart note" transcript on the encounter Note & Tasks tab. A new
scribe-soap-notebot runs transcribe → lang2fhir (createMulti) → persist the extracted FHIR resources to the patient chart → fhir2summary (narrative templatesoap-note-behavioral-health, find-or-create then reused viatemplate_id), returning a SOAP note; base URL is a requiredPHENOML_BASE_URLsecret matching referral-intake. The newSoapNotePanelreplacesScribePanelwith a "Generate note" button, an editable draft, and "Save to chart" that persists the note as aDocumentReference(LOINC 11506-3) linked to the patient/encounter, which then appears in the Documents tab and Timeline. This deletes the screening pieces (scribe-fillandbuildProfilebots,screeningutil, the GAD-7/PHQ-9 seed bundle, the Get Started card), registers the new bot indeploy-bots.ts, regeneratesexample-bots.json, and refreshessample-visit-transcript.txtfor the SOAP flow. The diff also carries two small pre-existing fixes on the branch: alocalStoragepolyfill intest.setup.tsand a possibly-undefined Bot guard inUploadDataPage.tsx.🤖 Generated with Claude Code