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nnUNet runner improvements #9108

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nnUNet runner improvements #9108

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bd82b95
nnunet runner: allow missing keys in datalist when copying
DanielNobbe Jul 27, 2026
09c00d0
nnunet runner: allow missing training key if only testing
DanielNobbe Jul 27, 2026
bc64b64
nnunet runner: get input channels and num classes from config
DanielNobbe Jul 27, 2026
9abc370
nnunet runner: convert_dataset: remove exception capture since it doe…
DanielNobbe Jul 27, 2026
b8b5135
nnunet runner: improve consistency in plans identifier
DanielNobbe Jul 27, 2026
96dddbf
nnunet runner: allow pipeline to finish when nnunet does not train al…
DanielNobbe Jul 27, 2026
d28afee
functionality to predict on and create datalists
DanielNobbe Sep 9, 2026
3fd137c
stylistic fixes
DanielNobbe Sep 9, 2026
e0db408
add import
DanielNobbe Sep 9, 2026
b13f6fc
improve documentation
DanielNobbe Sep 9, 2026
7f5bc98
improve new filename naming
DanielNobbe Sep 9, 2026
762bd25
Merge branch 'dev' into fix-nnunet
DanielNobbe Sep 9, 2026
bb68687
improve docstring
DanielNobbe Sep 10, 2026
30ffd54
add plans_identifier to tests
DanielNobbe Sep 10, 2026
3b8c827
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Sep 10, 2026
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