actaf/online update and clang-format

actaf/calibration/R3BActafCal2Hit.cxx

@@ -110,8 +110,9 @@ void R3BActafCal2Hit::Exec(Option_t*)
         auto ring = fActafGeo->GetRingId(pad);
         auto zpos = calData->GetZpos();
         auto energy = calData->GetEnergy();
+        auto maxAmpl = calData->GetEMaxAmpl();
         TVector3 track = fActafGeo->GetPosition(pad);
-        AddHitData(pad, (pad < 65 ? 1 : 2), ring, track.X(), track.Y(), zpos, energy, track);
+        AddHitData(pad, (pad < 65 ? 1 : 2), ring, track.X(), track.Y(), zpos, energy, track, maxAmpl);
     }
     return;
 }
@@ -134,12 +135,13 @@ R3BActafHitData* R3BActafCal2Hit::AddHitData(UInt_t padId,
                                              double ypos,
                                              double zpos,
                                              double energy,
-                                             TVector3 track)
+                                             TVector3 track,
+                                             double maxAmpl)
 {
     // It fills the R3BActafCalData
     TClonesArray& clref = *fActafHitData;
     Int_t size = clref.GetEntriesFast();
-    return new (clref[size]) R3BActafHitData(padId, side, ring, xpos, ypos, zpos, energy, track);
+    return new (clref[size]) R3BActafHitData(padId, side, ring, xpos, ypos, zpos, energy, track, maxAmpl);
 }
 
 ClassImp(R3BActafCal2Hit)

actaf/calibration/R3BActafCal2Hit.h

@@ -71,7 +71,8 @@ class R3BActafCal2Hit : public FairTask
                                 double ypos,
                                 double zpos,
                                 double energy,
-                                TVector3 track);
+                                TVector3 track,
+                                double maxAmpl);
 
   public:
     // Class definition

actaf/calibration/R3BActafMapped2Cal.cxx

@@ -20,6 +20,7 @@
 #include <TClonesArray.h>
 #include <TMath.h>
 #include <array>
+#include <fstream>
 #include <iostream>
 #include <numeric>
 #include <utility>
@@ -245,15 +246,26 @@ void R3BActafMapped2Cal::Exec(Option_t*)
             continue;
 
         std::array<double, ACTAF_BINS> waveform = mappedData->GetTrace();
+        int maxPos = FindMaxPosition(waveform);
 
         // Calculate rms before filtering
-        int maxPos = FindMaxPosition(waveform);
+
         double rmsRaw = ComputeBaselineMean(waveform, maxPos, 0);
         double meanRaw = ComputeBaselineMean(waveform, maxPos, 1) + mappedData->GetBaseline();
-        // Apply the SG filter to the waveform
+
+        // create baseline-subtracted copy and write it to file (temporary tool)
+        std::array<double, ACTAF_BINS> waveform_bs = waveform;
+        double baseline = meanRaw;
+        for (auto& x : waveform_bs)
+            x -= baseline;
+
+        // Apply the SG filter to the waveform (on baseline-subtracted data)
         if (fApplySGFilter)
             ApplySGFilter(waveform, fSgCoeffs);
 
+        // Use baseline-subtracted waveform for further processing
+        // waveform = waveform_bs;
+
         auto integral = IntegratePulse(waveform, mappedData->GetMaxpos());
         auto energy = integral * fEGain[pad - 1];
         auto energyMaxAmpl = mappedData->GetMaxampl() * fEGain[pad - 1];