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Sage-Bionetworks / Genie Public

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[GEN-2332] Add workflow to build genome nexus annotator#618

Merged

rxu17 merged 15 commits intodevelopSage-Bionetworks/Genie:developfrom

gen-2332-build-annotatorSage-Bionetworks/Genie:gen-2332-build-annotatorCopy head branch name to clipboard

Oct 28, 2025

Conversation Commits15 (15)Checks Files changed

Merged

[GEN-2332] Add workflow to build genome nexus annotator#618
rxu17 merged 15 commits intodevelopfrom
gen-2332-build-annotator

Commits

Commits on Oct 24, 2025

initial code to build annotator
rxu17
committed
fix dep
rxu17
committed
make all build dep as env vars, update docs
rxu17
committed
fix clone path
rxu17
committed
remove missing param, add latest commit hash
rxu17
committed
find jar file name dynamically
rxu17
committed
rename to annotator.jar, adjust output id
rxu17
committed
fix spacing, change env var hierarchy
rxu17
committed
update spacing
rxu17
committed
only run when you modify this file
rxu17
committed

Commits on Oct 27, 2025

add default value
rxu17
committed
add back commit hash
rxu17
committed
remove workflow_dispatch
rxu17
committed

Commits on Oct 28, 2025

only modify lines in config files, save to Genome Nexus Testing folder
rxu17
committed
update docs
rxu17
committed

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