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Improving Undersampled MRI with Deep Learning

Comparing Normalizing Flows and Deep Basis Pursuit

Angelos Georgios Koulouras, Jackson Lightfoot, Sami Khandker, Tarek Allam, Menelaos Kaskiris

The directories here are split as such:

  • deepinpy_documentation: contains all newly generated documentation for the DeepInPy research project
  • deepinpy_unet_implementation: contains all code related to the unet implementation added to deepinpy
  • mcmri_preprocessing: Contains all code related to preprocessing the input data
  • normalizing_flows_model: Contains all code related to the Normalizing Flows model

https://medium.com/@jaxon.lightfoot/improving-undersampled-mri-with-deep-learning-bf991672b006

References

[1] [1906.04032] Neural Spline Flows (Durkan et al.)

[2] [1905.11672] Invertible generative models for inverse problems: mitigating representation error and dataset bias (Asim et al.)

[3] [2003.08089] Compressed Sensing with Invertible Generative Models and Dependent Noise (Whang et al.)

[4] [1412.6980] Adam: A Method for Stochastic Optimization (Kingma and Ba)

[5] [1910.13110] Unsupervised Deep Basis Pursuit: Learning inverse problems without ground-truth data (Tamir et al.)

[6] [1505.04597] U-Net: Convolutional Networks for Biomedical Image Segmentation (Ronneberger et al.)

[7] Effectiveness of U-Net in Denoising RGB Images (Komatsu and Gonsalves)

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