use uv

.github/workflows/github-pages-mkdocs.yml

@@ -29,9 +29,14 @@ jobs:
         with:
           python-version: '3.12'
 
-      - name: Install dependencies
-        run: |
-          pip install .[docs]
+      - name: Install uv
+        uses: astral-sh/setup-uv@v4
+        with:
+          enable-cache: true
+          cache-dependency-glob: uv.lock
+
+      - name: Install Dependencies
+        run: uv sync --frozen --group docs
 
       - name: Deploy to GitHub Pages (Pull Request)
         env:
@@ -40,7 +45,7 @@ jobs:
           git config --global user.name '${{ github.actor }}'
           git config --global user.email '${{ github.actor }}@users.noreply.github.com'
 
-          mike deploy --push develop
+          uv run mike deploy --push develop
 
   deploy-main:
     if: github.event_name == 'push' && github.ref == 'refs/heads/main'
@@ -55,18 +60,23 @@ jobs:
       with:
         python-version: '3.12'
 
-    - name: Install dependencies
-      run: |
-        pip install .[docs]
+    - name: Install uv
+      uses: astral-sh/setup-uv@v4
+      with:
+        enable-cache: true
+        cache-dependency-glob: uv.lock
+
+    - name: Install Dependencies
+      run: uv sync --frozen --group docs
 
     - name: Deploy to GitHub Pages (Main)
       env:
         ACTIONS_DEPLOY_TOKEN: ${{ secrets.ACTIONS_DEPLOY_TOKEN }}
       run: |
         git config --global user.name '${{ github.actor }}'
         git config --global user.email '${{ github.actor }}@users.noreply.github.com'
-        mike deploy --push main
-        mike set-default --push main
+        uv run mike deploy --push main
+        uv run mike set-default --push main
 
   deploy-release:
     if: github.event_name == 'release'
@@ -80,9 +90,14 @@ jobs:
       with:
         python-version: '3.12'
 
-    - name: Install dependencies
-      run: |
-          pip install .[docs]
+    - name: Install uv
+      uses: astral-sh/setup-uv@v4
+      with:
+        enable-cache: true
+        cache-dependency-glob: uv.lock
+
+    - name: Install Dependencies
+      run: uv sync --frozen --group docs
 
     - name: Set release notes tag
       run: |
@@ -95,5 +110,5 @@ jobs:
       run: |
         git config --global user.name '${{ github.actor }}'
         git config --global user.email '${{ github.actor }}@users.noreply.github.com'
-        mike deploy --push --update-aliases ${RELEASE_TAG_VERSION} latest
-        mike set-default --push latest
+        uv run mike deploy --push --update-aliases ${RELEASE_TAG_VERSION} latest
+        uv run mike set-default --push latest

.github/workflows/pypi-release.yml

@@ -16,18 +16,28 @@ jobs:
     runs-on: ubuntu-latest
 
     steps:
-        - uses: actions/checkout@v3
+        - uses: actions/checkout@v4
         - name: Set up Python
           uses: actions/setup-python@v4
           with:
               python-version: "3.x"
+
+        - name: Install uv
+          uses: astral-sh/setup-uv@v4
+          with:
+            enable-cache: true
+            cache-dependency-glob: uv.lock
+
+        - name: Install Dependencies
+          run: uv sync --frozen --group dev
+
         - name: Install tools
           run: |
-              python -m pip install --upgrade pip
-              pip install wheel twine build
+              uv pip install twine
+
         - name: Build and publish
           run: |
-              python -m build  --sdist --wheel
+              uv build
               twine upload dist/*
           env:
               TWINE_USERNAME: ${{ secrets.PYPI_USERS }}

.github/workflows/release-bump.yml

@@ -62,13 +62,21 @@ jobs:
         with:
           python-version: 3.13
 
-      - name: Install Commitizen
+      - name: Install uv
+        uses: astral-sh/setup-uv@v4
+        with:
+          enable-cache: true
+          cache-dependency-glob: uv.lock
+
+      - name: Verify lock file is up to date
         run: |
-          python -m pip install --upgrade pip
-          pip install commitizen>=4.8.3
+          uv lock --check
+
+      - name: Install Dependencies
+        run: uv sync --frozen --group dev --group docs
 
       - name: Generate changelog
-        run: cz changelog --unreleased-version="${{ steps.get_version.outputs.VERSION }}" --incremental
+        run: uv run cz changelog --unreleased-version="${{ steps.get_version.outputs.VERSION }}" --incremental
 
       - name: Get user info
         id: user_info
@@ -88,7 +96,14 @@ jobs:
         run: |
           set -e  # Exit immediately if a command exits with a non-zero status
           echo "Bumping version to ${{ steps.get_version.outputs.VERSION }}"
-          cz bump --yes --check-consistency "${{ steps.get_version.outputs.VERSION }}"
+          uv run cz bump --yes --check-consistency "${{ steps.get_version.outputs.VERSION }}"
+
+          echo "Updating lock file after version bump"
+          uv lock
+
+          echo "Committing lock file update"
+          git add uv.lock
+          git commit -m "chore: update lock file after version bump" || echo "No lock file changes to commit"
 
           echo "Pushing changes to repository"
           if ! git push; then

.github/workflows/tests.yml

@@ -7,9 +7,6 @@ permissions:
 
 on:
   push:
-    branches: ['main']
-  pull_request:
-    branches: [main]
 
 jobs:
   main-package:
@@ -22,20 +19,34 @@ jobs:
       OS: ${{ matrix.os }}
 
     steps:
-      - uses: actions/checkout@v3
+      - uses: actions/checkout@v5
+        with:
+          fetch-depth: 0
+
       - name: Set up Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v4
+        uses: actions/setup-python@v6
         with:
           python-version: ${{ matrix.python-version }}
           architecture: x64
 
+      - name: Install uv
+        uses: astral-sh/setup-uv@v4
+        with:
+          enable-cache: true
+          cache-dependency-glob: uv.lock
+
+      - name: Verify lock file is up to date
+        shell: bash
+        run: |
+          uv lock --check
+
       - name: Install dependencies
         run: |
-            pip install .[dev]
+            uv sync --frozen --group dev
 
       - name: Run Tests
         run: |
-          pytest -vvv --cov=src/statista --cov-report=xml --junitxml=junit.xml -o junit_family=legacy
+          uv run pytest -vvv --cov=src/statista --cov-report=xml --junitxml=junit.xml -o junit_family=legacy
 
       - name: Upload test results to Codecov
         if: ${{ !cancelled() }}
@@ -46,4 +57,4 @@ jobs:
 
       - name: test Jupyter notebook
         run: |
-          pytest --nbval --nbval-lax --verbose
+          uv run pytest --nbval --nbval-lax --verbose

pyproject.toml

@@ -3,7 +3,6 @@ name = "statista"
 version = "0.6.3"
 description = "statistics package"
 readme = "README.md"
-requires-python = ">=3.11,<4"
 license = {text = "GPL-3.0-or-later"}
 authors = [
     {name = "Mostafa Farrag", email = "moah.farag@gmail.com"},
@@ -31,6 +30,7 @@ classifiers = [
     "Intended Audience :: Developers",
 ]
 
+requires-python = ">=3.11"
 dependencies = [
     "numpy>=2.0.0",
     "matplotlib>=3.9.0",
@@ -40,14 +40,20 @@ dependencies = [
     "loguru>=0.7.2",
 ]
 
-[project.optional-dependencies]
+[dependency-groups]
 dev = [
-    "nbval >=0.11.0",
-    "pre-commit >=3.7.1",
-    "pre-commit-hooks >=4.6.0",
-    "pytest >=8.2.2",
-    "pytest-cov >=5.0.0",
+    "pytest>=8.4.2",
+    "pytest-cov>=7.0.0",
+    "pre-commit>=4.3.0",
+    "pre-commit-hooks>=6.0.0",
+    "pytest-asyncio>=1.2.0",
+    "nest-asyncio>=1.6.0",
+    "nbval>=0.11.0",
+    "pytest-xdist>=3.8.0",
+    "mypy>=1.19.0",
+    "types-PyYAML>=6.0.12",
 ]
+
 docs = [
     "mkdocs >=1.5.3",
     "mkdocs-material >=9.5.3",
@@ -60,22 +66,48 @@ docs = [
     "mkdocs-table-reader-plugin  >=3.1.0",
     "mkdocs-mermaid2-plugin  >=1.2.1",
     "jupyter-contrib-nbextensions  >=0.7.0",
+    "mkdocs-panzoom-plugin",
     "notebook<7.0",
     "jupyter",
     "commitizen (>=4.8.3,<5.0.0)",
 ]
 
-[tool.setuptools.packages.find]
-where = ["src"]
-include = ["statista", "statista.*"]
-
 
 [project.urls]
 Homepage = "https://github.com/Serapieum-of-alex/statista"
 Documentation = "https://github.com/Serapieum-of-alex/statista"
 Repository = "https://github.com/Serapieum-of-alex/statista"
 
 
+[tool.hatch.build.targets.wheel]
+packages = ["src/statista"]
+#include = ["src/tsvkw/data/*"]
+
+
+[tool.commitizen]
+name = "cz_conventional_commits"
+version_provider = "pep621"
+tag_format = "$version"
+changelog_file = "docs/change-log.md"
+
+[tool.flake8]
+ignore = "E203, E266, E501, W503, E741"
+max-line-length = 88
+max-complexity = 18
+select = "B,C,E,F,W,T4"
+count = true
+
+
+[tool.black]
+profile = "flake8"
+line-length = 88
+skip-string-normalization = true
+
+[tool.isort]
+profile = "black"
+line_length = 88
+multi_line_output = 3
+
 [tool.pytest.ini_options]
 
 addopts = [
@@ -85,7 +117,8 @@ addopts = [
     "--cov-report=html",
     "--cov-report=xml:coverage-reports/coverage.xml"
 ]
-testpaths = ["tests"]
+testpaths = "tests"
+norecursedirs = "docs"
 markers = [
     "slow: mark test as slow.",
     "fast: mark test as fast.",
@@ -94,28 +127,46 @@ markers = [
     "integration: marks tests as integration (deselect with '-m \"not integration\"')",
 ]
 
-[tool.flake8]
-ignore = "E203, E266, E501, W503, E741"
-max-line-length = 88
-max-complexity = 18
-select = "B,C,E,F,W,T4"
 
-[tool.black]
-profile = "flake8"
-line-length = 88
-skip-string-normalization = true
+[tool.mypy]
+python_version = "3.12"
+warn_return_any = false
+warn_unused_configs = true
+disallow_untyped_defs = false
+disallow_incomplete_defs = false
+check_untyped_defs = true
+disallow_untyped_decorators = false
+warn_redundant_casts = true
+warn_unused_ignores = false
+warn_no_return = true
+warn_unreachable = true
+strict_optional = true
+ignore_missing_imports = true
+no_implicit_optional = false
 
-[tool.isort]
-profile = "black"
-line_length = 88
-multi_line_output = 3
+[[tool.mypy.overrides]]
+module = "tests.*"
+ignore_errors = true
 
-[tool.commitizen]
-name = "cz_conventional_commits"
-version_provider = "pep621"
-tag_format = "$version"
-changelog_file = "docs/change-log.md"
+[[tool.mypy.overrides]]
+module = "setup"
+ignore_errors = true
+
+[[tool.mypy.overrides]]
+module = "tsvkw.toetsmodel.models"
+# Complex parsing logic with dynamic types
+warn_return_any = false
+disallow_any_expr = false
+
+[[tool.mypy.overrides]]
+module = "tsvkw.config"
+# Configuration loading from YAML - unavoidable Any returns
+warn_return_any = false
+
+
+#[tool.uv]
+#managed = false
 
 [build-system]
-requires = ["setuptools>=61", "wheel"]
-build-backend = "setuptools.build_meta"
+requires = ["hatchling"]
+build-backend = "hatchling.build"