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Decontamination protocols for ancient DNA analysis

This repository includes documents and scripts for the Farrer et al. 2021 paper

Setup

The scripts included were performed in a Unix environment (e.g. Mac OSX or Linux) and R.

Data

The raw sequencing data for this project can be found on the NCBI website under the accession name: PRJNA688065

Supplemental_Information

This file contains the accession numbers and Sample IDs used for the SourceTracker analysis (i.e. shotgun data), the results for the G-tests, beta-diversity distances, and the alpha-diversity results

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