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Binary file modified _cite/.cache/cache.db
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64 changes: 54 additions & 10 deletions _data/citations.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -171,6 +171,7 @@
- Andrew I Su
publisher: eLife
pmid: '32180547'
pmcid: PMC7077981
date: '2020-03-17'
link: https://doi.org/ggqqc6
orcid: 0000-0002-9859-4104
Expand Down Expand Up @@ -649,7 +650,8 @@
- Chunlei Wu
publisher: mSystems
pmid: '41475378'
date: '2025-12-31'
pmcid: PMC12911352
date: '2026-02-17'
link: https://doi.org/hbhrp8
orcid: 0000-0002-9859-4104
ginger-tsueng-list: true
Expand Down Expand Up @@ -1276,6 +1278,7 @@
- Ralph Feuer
publisher: Journal of Virology
pmid: '21471247'
pmcid: PMC3126326
date: '2011-06-15'
link: https://doi.org/bvfvrq
orcid: 0000-0001-9536-9115
Expand Down Expand Up @@ -1526,15 +1529,16 @@
- type: pdf
link: pdf/Tsueng_2007b.pdf
- id: doi:10.1093/bioinformatics/btag008
title: A Case-Based Explainable Graph Neural Network Framework for Mechanistic Drug
Repositioning
title: A case-based explainable graph neural network framework for mechanistic drug
repositioning
authors:
- Adriana Carolina Gonzalez-Cavazos
- Roger Tu
- Meghamala Sinha
- Andrew I Su
publisher: Bioinformatics
pmid: '41533699'
pmcid: PMC12891909
date: '2026-01-14'
link: https://doi.org/hbkdc2
orcid: 0000-0002-9859-4104
Expand Down Expand Up @@ -1972,10 +1976,21 @@
file: sources.yaml
image: thumbnail/Michaels_2020.jpg
- id: doi:10.1093/bioadv/vbag036
title: pendingpublications
authors: []
publisher: ''
date: ''
title: 'Desiderata for a biomedical knowledge network: opportunities, challenges
and future directions'
authors:
- Chunlei Wu
- Hongfang Liu
- Jason Flannick
- Mark A Musen
- Andrew I Su
- Lawrence E Hunter
- Thomas M Powers
- Cathy H Wu
publisher: Bioinformatics Advances
pmid: '41867661'
pmcid: PMC13004217
date: '2026-01-01'
link: https://doi.org/hbnck2
orcid: 0000-0002-9859-4104
chunlei-wu-list: true
Expand Down Expand Up @@ -2127,15 +2142,37 @@
buttons:
- type: pdf
link: pdf/Gopal_2017.pdf
- id: doi:10.48550/ARXIV.2605.30283
title: 'mcp-proto-okn: Natural-language access to open scientific knowledge graphs
through the Model Context Protocol'
authors:
- Peter W. Rose
- Benjamin M. Good
- Amanda M. Saravia-Butler
- Charlotte A. Nelson
- James P. Balhoff
- Yaphet Kebede
- Patricia L. Whetzel
- Christopher Bizon
- Andrew I. Su
- Sergio E. Baranzini
publisher: arXiv
date: '2026-01-01'
link: https://doi.org/hb563f
orcid: 0000-0002-9859-4104
andrew-su-list: true
plugin: orcid.py
file: orcid.yaml
- id: doi:10.1093/gigascience/giag007
title: Federated Knowledge Retrieval Elevates Large Language Model Performance on
Biomedical Benchmarks
title: Federated knowledge retrieval elevates large language model performance on
biomedical benchmarks
authors:
- Janet Joy
- Andrew I Su
publisher: GigaScience
pmid: '41553353'
date: '2026-01-19'
pmcid: PMC12888809
date: '2026-01-01'
link: https://doi.org/hbkdc3
orcid: 0000-0002-9859-4104
andrew-su-list: true
Expand Down Expand Up @@ -2438,6 +2475,7 @@
- Laura D. Hughes
publisher: Nature Methods
pmid: '36823332'
pmcid: PMC10399614
date: '2023-02-23'
link: https://doi.org/gr9gvs
orcid: 0000-0002-9859-4104
Expand Down Expand Up @@ -3099,6 +3137,7 @@
- William E. Balch
publisher: Journal of Biological Chemistry
pmid: '30006345'
pmcid: PMC6120211
date: '2018-08-01'
link: https://doi.org/gd7nt5
orcid: 0000-0002-9859-4104
Expand Down Expand Up @@ -3909,6 +3948,7 @@
- Peipei Ping
publisher: Circulation Research
pmid: '25814682'
pmcid: PMC4721634
date: '2015-03-27'
link: https://doi.org/gtrg2x
orcid: 0000-0002-9859-4104
Expand Down Expand Up @@ -4199,6 +4239,7 @@
- Andrew I Su
publisher: Journal of Biomedical Semantics
pmid: '23734599'
pmcid: PMC3633003
date: '2013-04-01'
link: https://doi.org/gtrg24
orcid: 0000-0002-9859-4104
Expand Down Expand Up @@ -4473,6 +4514,7 @@
- Andrew I Su
publisher: Journal of Biomedical Semantics
pmid: '22541597'
pmcid: PMC3337266
date: '2012-04-24'
link: https://doi.org/gtrg29
orcid: 0000-0002-9859-4104
Expand Down Expand Up @@ -5274,6 +5316,7 @@
- William E. Balch
publisher: Molecular Biology of the Cell
pmid: '15944222'
pmcid: PMC1182321
date: '2005-08-01'
link: https://doi.org/ct86r5
orcid: 0000-0002-9859-4104
Expand Down Expand Up @@ -5458,6 +5501,7 @@
- Garret M. Hampton
publisher: The American Journal of Pathology
pmid: '12368205'
pmcid: PMC1867312
date: '2002-10-01'
link: https://doi.org/b8w9fs
orcid: 0000-0002-9859-4104
Expand Down
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