v1.4

• tyto now wraps all responses returned as strings with either the URI or Term class
• For comparison operations, tyto treats these objects like primitive strings
• However, these objects are extended with extra methods enabling inference, such as:
  • get_instances()
  • is_instance

v1.2.1

• Adds a case-sensitive fallback when a case-insensitive query produces multiple results
• Fixes incorrect resolution of the SO.deletion term to the wrong URI (mistaken for owl:Deletion)

v1.2

Support PAML

v1.1

Support PubChem

v1.0

• Includes all ontologies interoperable with the Synthetic Biology Open Language (SBOL)

v1.0b2

• Support using terms as subscripts on Ontology objects
• Case-insensitive searching for terms
• Add exception for non-unique rdfs:labels
• Add get_ontologies method to list ontologies hosted at an endpoint
• Updated documentation

v1.0b1

• Exposes Ontobee and EBILookupService instances in tyto's top level namespace
• Adds more inference methods to URI class
• Supports sanitization of spaces in term names by default

1.0-beta

• Frameworks for querying REST interfaces, SPARQL endpoints, and rdflib Graphs
• Built-in query interfaces for Ontobee and EBI Ontology Lookup Service
• Built-in support for NCBITaxonomy, Sequence Ontology, Systems Biology Ontology, National Cancer Institute Thesaurus, and Ontology of Units and Measures
• Methods for performing inference directly on a term URI, e.g., parent_term.is_parent_of(child_term)
• Conversion of URIs into identifiers.org namespace
• Supports local caching of results; cache size is user-configurable
• Support American English in OM terms
• Logging

tyto alpha 5

Improved language support for American English in OM ontology

tyto alpha 0

Support for the following ontologies:

• National Cancer Institute Thesaurus (NCIT)
• Systems Biology Ontology (SBO)
• Sequence Ontology (SO)
• Ontology of Units and Measures (OM)