GitHub - UCCC-BBSR/Twist-Breakpoint-Pipeline-OG: Andrew's original Twist breakpoint analysis pipeline · GitHub

Name		Name	Last commit message	Last commit date
Data		Data
scripts		scripts
supplemental		supplemental
.gitignore		.gitignore
config_loose.sh		config_loose.sh
fastp.config		fastp.config
filter_vcfs_loose_FUSIONS.sh		filter_vcfs_loose_FUSIONS.sh
output.md		output.md
pipeline_outline_ag.docx		pipeline_outline_ag.docx
pipeline_outline_ag.md		pipeline_outline_ag.md
run_sarek_loose.sh		run_sarek_loose.sh
samples.csv		samples.csv
subset_bam.sh		subset_bam.sh
tiddit_loose_v3.config		tiddit_loose_v3.config
twist_coverage.sh		twist_coverage.sh

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Andrew's original Twist breakpoint analysis pipeline

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