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HIV disability weights #1585

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HIV disability weights #1585

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13 changes: 10 additions & 3 deletions src/tlo/methods/hiv.py
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Original file line number Diff line number Diff line change
Expand Up @@ -458,12 +458,16 @@ def read_parameters(self, data_folder):
# DALY weights
# get the DALY weight that this module will use from the weight database (these codes are just random!)
if "HealthBurden" in self.sim.modules.keys():
# Chronic infection but not AIDS (including if on ART)
# (taken to be equal to "Symptomatic HIV without anaemia")
# Symptomatic HIV without anemia
self.daly_wts["hiv_infection_but_not_aids"] = self.sim.modules[
"HealthBurden"
].get_daly_weight(17)

# AIDS with antiretroviral treatment without anemia
self.daly_wts["hiv_infection_on_ART"] = self.sim.modules[
"HealthBurden"
].get_daly_weight(20)

# AIDS without anti-retroviral treatment without anemia
self.daly_wts["aids"] = self.sim.modules["HealthBurden"].get_daly_weight(19)

Expand Down Expand Up @@ -1293,7 +1297,10 @@ def report_daly_values(self):
dalys = pd.Series(data=0, index=df.loc[df.is_alive].index)

# All those infected get the 'infected but not AIDS' daly_wt:
dalys.loc[df.hv_inf] = self.daly_wts["hiv_infection_but_not_aids"]
dalys.loc[df.hv_inf & (df.hv_art == "not")] = self.daly_wts["hiv_infection_but_not_aids"]

# infected and on ART and virally suppressed
dalys.loc[df.hv_inf & (df.hv_art == "on_VL_suppressed")] = self.daly_wts["hiv_infection_on_ART"]

# Overwrite the value for those that currently have symptoms of AIDS with the 'AIDS' daly_wt:
dalys.loc[
Expand Down